Part of scaffold_1101 (Scaffold)

For more information consult the page for scaffold_1101 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PODN ENSTTRG00000007862 (Bottlenosed dolphin)

Gene Details

podocan

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007437, Bottlenosed dolphin)

Protein Percentage 92.21%
cDNA percentage 93.54%
Ka/Ks Ratio 0.2417 (Ka = 0.0457, Ks = 0.189)

PODN ENSBTAG00000012514 (Cow)

Gene Details

podocan

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016614, Cow)

Protein Percentage 88.47%
cDNA percentage 89.12%
Ka/Ks Ratio 0.15197 (Ka = 0.0667, Ks = 0.4392)

PODN  (Minke Whale)

Gene Details

podocan

External Links

Gene match (Identifier: BACU000257, Minke Whale)

Protein Percentage 99.51%
cDNA percentage 99.19%
Ka/Ks Ratio 0.05072 (Ka = 0.002, Ks = 0.0393)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1992 bp    Location:554284..533254   Strand:-
>bmy_15167
ATGCGTGCGGCACTGACCTTCCCGATCCGGTCCGGGAGGTGCAGAAGGATACGCACCCTGCGCTTGCGGGGCATCACGGAACGACGGAGGGTCACGCAAACTGAGCGTCTGCCCTACGACTTCGGGCTGGCTGGGGAAGGCACCATGGCCCGGAGCAGGGCGCTGCTGCTCCTGCTGCTGTTGCCGCTGCAGCTGCAGCTGGGACCGGGGCTCGCCGTGAGGGCCCCGGTGTCTGGCCGAAGTGGAGCCCACAGCCTGAGCCCTGAAGAGAATGAATTCGTGGAGGAGGAGCCGGTGCTGGTCCTGAGCCCTGAGGAGCCGGGGCGCGGCCCGCCCACCATCGACTGCCCCCGAGACTGTGCCTGCTCCCAGGAGGGGGTCGTGGACTGCGGTGGCATCGACCTGCGCGAGTTCCCAGGGGACCTGCCTGAGCACACCAACCACCTGTCCCTGCAGAACAACCAGCTGGAGAAGATCTACCCCAGGGAGCTCTCCCGGCTGAATCGGCTGGAGACTCTGAATCTCCAGAACAACCGCCTGACTTCCCGAGGGCTCCCGGAGGAGGCATTTGAGCATCTGACCAACCTCAATTACCTGTACCTGGCCAATAACAAGCTGACCTTGGCACCCCGGTTCCTGCCAAACGCCCTGATCAGTGTGGACTTTGCTGCCAACTATCTCACCAAGATCTACGGGCTCACCTTTGGCCAGAAGCCAAACTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGATGCTGGGCTGCCGGACAACATGTTCAATGGCTCCAGCAACGTGGAGATCCTCATCCTGTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCTGCCACCTGCCCTCTACAAGCTGCACCTCAAGAACAACAAGCTGGAGAAGATCCCACCAGGGGCCTTCAGTGAGCTGAGCAACCTGCGTGAGCTGTACCTGCAGAACAACTACCTGACTGATAAGGGCCTGGACAACGAGACCTTCTGGAAGCTCTCCAGCCTGGAGTACCTGGATCTGTCCAGCAACAACCTGTCGCGGGTCCCGGCTGGGCTGCCGCGCAGCCTGGTGCTGCTGCACCTGGAGAAGAACGCCATCCGGAGCGTGGACGCAGACGTGCTGACCCCCATCCGCAGCCTCGAGTACCTGCTGCTGCACAGCAACCAGCTGCGCGCTCAGGGCATCCACCCGCGGGCCTTCCAGGGCCTCAAACGGCTGCACACGGTGCACCTGTACAACAACGCGCTGGAGCGCGTGCCCAGCGGCCTGCCCCGCCGCGTGCGCACCCTCATGATCCTGCACAACCAGATCACCGGCATCGGCCGCGAAGACTTTGCCACCACCTACTTCCTGGAGGAGCTCAACCTCAGCTACAACCGCATCACCAGCCCGAAGGTGCACCGCGATGCCTTCCGCAAGCTGCGCCTGCTGCGCTCCCTGGACCTGTCAGGCAACCGGCTGCGCACGCTACCGCCCGGGCTGCCGCGCAACGTGCACGTGCTGAAGATCAAGCGCAATGAGCTGGCCGCCCTGGCGCGCGGGGCGCTGGCCGGCATGGCCCAGCTGCGGGAGCTCTACCTCACGGGCAACAGGCTGCGCAGCCGGGCCCTGGCCCCCCGTGCCTGGGCCGACCTCGCTGGTCTGCAGCTGCTCGACATCGCCGGGAATCAGCTCACGGATATCCCCGAGAGGCTCCCCAAGTCGCTCGAGTACCTGTACCTGCAGAACAACAAGATTAGTACTGTGCCCGCCAACGCCTTTGACTCCACACCCAACCTCAAAGGGATCTTTCTCAGGTTTAACAAGCTGGCCGTGGGCTCTGTGGTGGAAAGTGCCTTCCGGAAGCTGAAGCACCTGCAGGTCTTGGACATAGAAGGCAACCATGAGTATGGTGACGTTTCCAAGGACCGGGGCCGGTTGGAAGAGGAAAAGGAGGAGGAGGAGAAGGACGAGGAGGACGAGGAGGAAGAGGAAAGGTGGTAG

Related Sequences

bmy_15167T0 Protein

Length: 664 aa      View alignments
>bmy_15167T0
MRAALTFPIRSGRCRRIRTLRLRGITERRRVTQTERLPYDFGLAGEGTMARSRALLLLLLLPLQLQLGPGLAVRAPVSGRSGAHSLSPEENEFVEEEPVLVLSPEEPGRGPPTIDCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIYPRELSRLNRLETLNLQNNRLTSRGLPEEAFEHLTNLNYLYLANNKLTLAPRFLPNALISVDFAANYLTKIYGLTFGQKPNLRSVYLHNNKLADAGLPDNMFNGSSNVEILILSSNFLRHVPKHLPPALYKLHLKNNKLEKIPPGAFSELSNLRELYLQNNYLTDKGLDNETFWKLSSLEYLDLSSNNLSRVPAGLPRSLVLLHLEKNAIRSVDADVLTPIRSLEYLLLHSNQLRAQGIHPRAFQGLKRLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGREDFATTYFLEELNLSYNRITSPKVHRDAFRKLRLLRSLDLSGNRLRTLPPGLPRNVHVLKIKRNELAALARGALAGMAQLRELYLTGNRLRSRALAPRAWADLAGLQLLDIAGNQLTDIPERLPKSLEYLYLQNNKISTVPANAFDSTPNLKGIFLRFNKLAVGSVVESAFRKLKHLQVLDIEGNHEYGDVSKDRGRLEEEKEEEEKDEEDEEEEERW*