Part of scaffold_1120 (Scaffold)

For more information consult the page for scaffold_1120 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX7 ENSTTRG00000014763 (Bottlenosed dolphin)

Gene Details

sorting nexin 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013998, Bottlenosed dolphin)

Protein Percentage 70.62%
cDNA percentage 74.58%
Ka/Ks Ratio 0.48766 (Ka = 0.1012, Ks = 0.2075)

SNX7 ENSBTAG00000031461 (Cow)

Gene Details

sorting nexin-7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042058, Cow)

Protein Percentage 84.32%
cDNA percentage 87.87%
Ka/Ks Ratio 0.31075 (Ka = 0.0964, Ks = 0.3101)

SNX7  (Minke Whale)

Gene Details

sorting nexin 7

External Links

Gene match (Identifier: BACU002787, Minke Whale)

Protein Percentage 84.57%
cDNA percentage 88.98%
Ka/Ks Ratio 0.58699 (Ka = 0.1077, Ks = 0.1835)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1392 bp    Location:418273..375542   Strand:-
>bmy_15169
ATGTCTAAAATAACATTAGGCAAATGTCTTCTGTCTTATATTGCATGTGCTGTTATTTTCTCCTACTTTCTTCAGACGTCTCGTGGGGAATTTGACTCCAGTGAATTTGAAGTTAGGAGACGTTATCAAGATTTCCTTTGGTTGAAAGAAAGACTTGAAGAAGCACACCCCACTCTGATTATTCCACCGTTGCCAGAAAAGTTTATAGTGAAAGGAATGGTGGAACGCTTTAACGATGACTTCATTGAGACACGCAGGAAGGCATTGCATAAATTTTTGAACCGAATTGCTGATCATCCAACTCTAACATTTAATGAAGACTTTAAAGTTTTTCTTACTGCACAAGCTTGGGAACTCTCTTCTCACAAGAAGCAAGGGCCTGGATTACTCAGCAGGATGGGGCAGACGGTCAGAGCGGTTGCATTATCAATGAGAGGAGTTAAAAGCCGCCCCGAGGAGTTCATGGAAATGAATAACTTTATTGAAATATTTAGCCAGAAAATAAATTTGATAGATAAAATATCTCAGAGAATTTACAAGGAGGAAAGGGAATATTTTGATGAAATGAAAGAATATGGCCCAATTCATATTCTGTGGTCAGCATCAGAAGAAGATCTGGCTGATACTCTAAAAGGTGTTGCGAGCTGCATTGACAAATGCTGTAAGGCCACTGAAAAACGGATGTCTGGACTCTCAGAGGCCCTGCTTCCTGGTGTCATGAAAAGAAGAGATCAAATACAGGCAGAACTGGATTCCAAAGTTGAAGCTTTGACCTCTAAAAAGGCAGATACTGATCTGCATTCAATAAATGATACTAGAATTTCTTCCAAAAATCGATTATACATTGAGTACCAGGCCAGCATATCTGATGTGAGCACAAACTTGAACACCAAATTACTCGTGTTAACTGTTACCCAGAAAATTAGTCAGGAGATGTTTGCGGAGCTTGTGTCAGTAAAAATTTTGATCTATCACAGACCCTCACAGCAGGAAAATGCTGGACACATTCTGCATATTCCATTAACGAGGATACGAAAGGCGCATGCACATATGCCAGATGTGGTCATCACTGTCACATGTAGAAATGCAAATACCATCCTTGATAACGCTAGAGACAAAGAAAACAAAGATAATCAGAAGGCTATCCAGCAAGAATATAACAAGCTCCTTAAGCTTACGGAAGAGATTGGAAAACTGGAAGATAAAGTGGAGTGCGCTAATAATGCCTTGAAAGCAGATTGGGAAAGATGGAAACAAAACATGCAAAATGATATCAAGTCAGCATTTACAGATATGGCTGAGGAGAATATCCACTACTATGAACAGGGTTTGCAAAATGAGGAAAGGACCAAAGAGAAAATGTTCACGGCAATTCCATTGAACTCCAAGTGA

Related Sequences

bmy_15169T0 Protein

Length: 464 aa      View alignments
>bmy_15169T0
MSKITLGKCLLSYIACAVIFSYFLQTSRGEFDSSEFEVRRRYQDFLWLKERLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKVFLTAQAWELSSHKKQGPGLLSRMGQTVRAVALSMRGVKSRPEEFMEMNNFIEIFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLADTLKGVASCIDKCCKATEKRMSGLSEALLPGVMKRRDQIQAELDSKVEALTSKKADTDLHSINDTRISSKNRLYIEYQASISDVSTNLNTKLLVLTVTQKISQEMFAELVSVKILIYHRPSQQENAGHILHIPLTRIRKAHAHMPDVVITVTCRNANTILDNARDKENKDNQKAIQQEYNKLLKLTEEIGKLEDKVECANNALKADWERWKQNMQNDIKSAFTDMAEENIHYYEQGLQNEERTKEKMFTAIPLNSK*