Part of scaffold_1111 (Scaffold)

For more information consult the page for scaffold_1111 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCIRG1 ENSTTRG00000003830 (Bottlenosed dolphin)

Gene Details

T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003606, Bottlenosed dolphin)

Protein Percentage 69.69%
cDNA percentage 70.78%
Ka/Ks Ratio 0.18235 (Ka = 0.0286, Ks = 0.1569)

TCIRG1 ENSBTAG00000000292 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000367, Cow)

Protein Percentage 68.01%
cDNA percentage 73.99%
Ka/Ks Ratio 0.17125 (Ka = 0.2342, Ks = 1.3676)

TCIRG1  (Minke Whale)

Gene Details

T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3

External Links

Gene match (Identifier: BACU003552, Minke Whale)

Protein Percentage 97.34%
cDNA percentage 98.37%
Ka/Ks Ratio 0.25472 (Ka = 0.0119, Ks = 0.0466)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2685 bp    Location:601102..591628   Strand:-
>bmy_15191
ATGGGCTCCATGTTCCGGAGTGAGGAGGTGGTGCTGGTCCAGCTCTTCCTGCCCACAGCTGCTGCCTACGCTTGCGTGAGCCAGCTTGGGGAGCTGGGCCTTGTGGAGTTCAGAGACGAGGAGGTGCAGCGGGCTGGGCTGACGCTGCCTCTGCCTGAGGCGGGGCTGCCGGCGCCCCTGCCCCGCGACCTTCTGCGCATCCAGGAGGAGACGGATCGCCTAGCACAGGAGCTCCGGGACGTGCGGGGCAACCAGCAGGCCCTGCGGGCCCAGCTCCACCAGCTGCAGCTCCACTCGGCTGTACTGGGCCAGGGCCACGGCCCCCCGTTGGCAGCCAGCCACACAGATGGGTCCCTGGAAAGAAGCCCCCTGCTCCAGTCCCCCGGGGGGCCGCACCAGGACCTGAGGGTCAACTTCGTGGCAGGTGCTGTGGAACCCCACAAGGCCGCCGCCCTGGAGCGCCTGCTCTGGAGGGCCTGCCGCGGCTTCCTCATCGCCAGCTTCAGGGAGATGGAGCCGCTGGAGGACCCCGTGACGGGTGAGCCTGCGACCTGGATGACCTTCCTCATCTCCTACTGGGGCGAGCAGATCGGGCAGAAGATCCACAAGATCACTGACTGCTTCCACTGCCATGTCTTCCCATTTGCGGAGCAGGAGGAGGCCTGCCGCGCAACCCTGCAGCAGCTGCAGCAGCAGAGCCAAGAGCTGCGGGAGGTCCTGGGTGAGACGGAGCGCTTCCTGAGCCAGGTGCTGGGCCGGGTGCAGAGACTGTTGCCGCCCTGGCAGGTGCAGATCCGCAAGATGAAGGCCGTGTACCTGGCCCTCAACCAGTGCAGCGTGAGCACCACACACAAGTGCCTCATCGCCGAGGCCTGGTGTGCCACGCGCGACCTGCCCACCCTGCAGCAGGCGCTGCAGGGCAGCTCGGTGAGCATGGCGGGGGGGGGGGGGGTCTCCCGCCCTCCCCTGCTGCCAGGCAGGGGCTGGTTTCCTCCTCACAACACATCTCCCATTCCCGGTGCCATCAGCGCCGTGCCTTTGCCGGGGCTCGGAGAGGAGGGGCTGCCCTGGGTCCCCTGGCTCCCACCCAGCGAGTCCCCACAGTGCTCTCCATCTCTAGCTGGCCGTGGCTGGAGGGTCCGAGGGTCCCTGAAGGCCCCTGCCATCAGTCTTGTCTGTCTGTCTGCCTGCCTGCCTGCCTGCCGGGTGCCCCAGAGCGAGGCGGGTGTGAGCGCCGTGGTTCACCGCATCCCCTGCCGGGACATGCCCCCCACACTCATCCGTACCAACCGCTTCACGGCCAGCTTCCAGGGCATCGTGGACGCCTACGGTGTGGGCCGCTACCAGGAGGTCAACCCCGCGCCCTACACCATCATCACCTTCCCCTTCCTCTTCGCCGTCATGTTCGGTGACGTGGGCCACGGGCTGCTCATGTTTCTCTTCGCCCTGGCCATGGTGCTGGCCGAGAACCGGCCAGCCGTGAAGACGGCGCAGAACGAGATCTGGAGGACCTTCTTCAGGGGTCGCTACCTGCTCCTGCTCATGGGCCTGTTCTCCGTCTACACCGGCTTCATCTACAACGAGTGCTTCAGCTGCGCCACGGCCGTCTTCCCCTCGGGCTGGAGCGTGGCGGCCATGGCCAACCAGTCGGGCTGGAGCGACGCCTTCCTGGCCCAGCAGCCGCTGCTCTCCCTGGACCCCAACGTCACCGGCGTCTTCCTGGGACCGTACCCCTTCGGCATCGACCCGGTCTGGAGCCTGGCTGTCAACCACCTGAGCTTCCTCAACTCCTTCAAGATGAAGATGTCCGTCATCCTGGGGGTCACCCACATGACCTTCGGGGTGGTCCTGGGAGTCTTCAACCACATGCACTTCGGCCAGTGGTACCGGCTGCTGCTGGAGACCCTCCCCGAGCTGGTCTTCCTGCTGGGGCTGTTCGGCTACCTCGTCTTCCTGGTCGCCTACAAGTGGCTGCGAGTCACGGCCGCCAGCGCTGCCTCGGCCCCCAGCATCCTCATCCACTTCATCAACATGTTCCTCTTCTCCAGCAGCCCCACCAACCGGCCGCTTTTCTCAGGGCAGGAGGTGGTGCAGCCCACGCTGGTGGTCCTGGCCCTGGTCATGGTGCCCGTCCTGCTGCTCGGCACGCCCTTGTTCCTGTGCCGGGAGCACCGCCGCTGCCACTCTCGGAGGAGGCAACAGCCGGATAAGGACACGGCCAGGCTCCTGGACCTGCCTGACACGTCCCTGGCCAGCCAGGGCTCTGATGAGGAGAAGGCAGGATGCCCAGGGGACCAGGAGGAGGCCGAGTTTGTCCTGTCCGAGGTGTTCATGCACCAAGCCATCCACACCATCGAGTTCTGCCTGGGCTGCATCTCCAACACGGCCTCCTACCTGCGCCTCTGGGCCCTGAGCCTGGCCCACGCCCAGCTGTCACAGGTCCTGTGGGCCATGGTGATGCGAGCCGGCCTGAGCCTGGGCGGCGAGATGGGTGTGGCGGCTGTGGTGCTGGTCCCTGTCTTCGCCGCCTTCGCCGTGATGACCGTGGCCATCCTGCTGGTGATGGAGGGGCTCTCGGCCTTCCTGCACGCGCTGCGGCTGCACTGGGTGGAGTTCCAGAACAAGTTCTACTCGGGTACTGGCTACAAGCTGAGCCCCTTCACCTTCGCCGTGGAGGATGAATAG

Related Sequences

bmy_15191T0 Protein

Length: 895 aa      View alignments
>bmy_15191T0
MGSMFRSEEVVLVQLFLPTAAAYACVSQLGELGLVEFRDEEVQRAGLTLPLPEAGLPAPLPRDLLRIQEETDRLAQELRDVRGNQQALRAQLHQLQLHSAVLGQGHGPPLAASHTDGSLERSPLLQSPGGPHQDLRVNFVAGAVEPHKAAALERLLWRACRGFLIASFREMEPLEDPVTGEPATWMTFLISYWGEQIGQKIHKITDCFHCHVFPFAEQEEACRATLQQLQQQSQELREVLGETERFLSQVLGRVQRLLPPWQVQIRKMKAVYLALNQCSVSTTHKCLIAEAWCATRDLPTLQQALQGSSVSMAGGGGVSRPPLLPGRGWFPPHNTSPIPGAISAVPLPGLGEEGLPWVPWLPPSESPQCSPSLAGRGWRVRGSLKAPAISLVCLSACLPACRVPQSEAGVSAVVHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITFPFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKTAQNEIWRTFFRGRYLLLLMGLFSVYTGFIYNECFSCATAVFPSGWSVAAMANQSGWSDAFLAQQPLLSLDPNVTGVFLGPYPFGIDPVWSLAVNHLSFLNSFKMKMSVILGVTHMTFGVVLGVFNHMHFGQWYRLLLETLPELVFLLGLFGYLVFLVAYKWLRVTAASAASAPSILIHFINMFLFSSSPTNRPLFSGQEVVQPTLVVLALVMVPVLLLGTPLFLCREHRRCHSRRRQQPDKDTARLLDLPDTSLASQGSDEEKAGCPGDQEEAEFVLSEVFMHQAIHTIEFCLGCISNTASYLRLWALSLAHAQLSQVLWAMVMRAGLSLGGEMGVAAVVLVPVFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTFAVEDE*