Part of scaffold_1121 (Scaffold)

For more information consult the page for scaffold_1121 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HPCAL1 ENSTTRG00000004586 (Bottlenosed dolphin)

Gene Details

hippocalcin-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004307, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.48%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0454)

HPCAL1 ENSBTAG00000004259 (Cow)

Gene Details

Hippocalcin-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005577, Cow)

Protein Percentage 100.0%
cDNA percentage 94.99%
Ka/Ks Ratio 0.001 (Ka = 0.0006, Ks = 0.5559)

HPCAL1  (Minke Whale)

Gene Details

hippocalcin-like 1

External Links

Gene match (Identifier: BACU016783, Minke Whale)

Protein Percentage 99.48%
cDNA percentage 99.65%
Ka/Ks Ratio 0.13084 (Ka = 0.002, Ks = 0.0152)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 630 bp    Location:534347..540564   Strand:+
>bmy_15219
ATGGCCCCAGCCCGGGCCCCTGTCTTGCAGGTGTCGCCGCCGGCCGCCATGGGCAAGCAGAACAGCAAGCTGCGGCCCGAGGTGCTGCAGGACCTGCGGGAGAACACGGAGTTCACGGACCACGAGCTGCAGGAGTGGTACAAGGGCTTCCTCAAGGACTGCCCCACCGGCCACCTGACCGTGGACGAGTTCAAGAAGATCTACGCCAACTTCTTCCCCTACGGCGACGCCTCCAAGTTCGCGGAGCACGTCTTCCGCACCTTCGACACCAACGGCGACGGCACCATCGACTTCCGGGAGTTCATCATCGCGCTGAGCGTGACCTCGCGGGGCAAGCTGGAGCAGAAGCTCAAGTGGGCCTTCAGCATGTACGACCTGGACGGCAACGGCTACATCAGCCGCAGCGAGATGCTGGAGATCGTGCAGGCTATATACAAAATGGTGTCCTCCGTGATGAAGATGCCCGAGGATGAGTCCACGCCGGAGAAACGGACGGACAAGATCTTCAGGCAGATGGACACCAACAATGATGGCAAATTGTCCCTGGAAGAATTCATTAAAGGTGCCAAGAGCGACCCATCCATCGTCCGGTTGTTACAGTGTGACCCCAGCAGCGCCAGTCAGTTCTAA

Related Sequences

bmy_15219T0 Protein

Length: 210 aa      View alignments
>bmy_15219T0
MAPARAPVLQVSPPAAMGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVDEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDPSIVRLLQCDPSSASQF*