Part of scaffold_1129 (Scaffold)

For more information consult the page for scaffold_1129 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGCG ENSTTRG00000011641 (Bottlenosed dolphin)

Gene Details

sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011037, Bottlenosed dolphin)

Protein Percentage 89.3%
cDNA percentage 90.53%
Ka/Ks Ratio 0.56614 (Ka = 0.0856, Ks = 0.1512)

SGCG ENSBTAG00000001865 (Cow)

Gene Details

Gamma-sarcoglycan

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002431, Cow)

Protein Percentage 80.07%
cDNA percentage 83.76%
Ka/Ks Ratio 0.41421 (Ka = 0.1388, Ks = 0.3351)

SGCG  (Minke Whale)

Gene Details

sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)

External Links

Gene match (Identifier: BACU000153, Minke Whale)

Protein Percentage 88.19%
cDNA percentage 90.72%
Ka/Ks Ratio 0.71112 (Ka = 0.0911, Ks = 0.1281)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 816 bp    Location:443280..414686   Strand:-
>bmy_15222
ATGGTGCGTGAACAATACACCACGACCACAGAAGGCACCCGCGTAGAGCGGCCAGAGAACCAGTCTGTCTACAAAATCGGCATTTATGGCTGGAGAAAGCGTTGCCTGTACTTATTCGTTCTTCTTTTGCTCATCATCCTCCTTGTGAATTTTGCTCTTACAATTTGGATTCTTAAAGTGATGTGGTTTTCCCCAACAGGGATGGGTCACCTGTATGTTACAGAAGATGGACTTCGCCTGGAGGGGGAATCGGAGTTTTTATTCCCACTGTATGCCAAAGAAATACACTCCAGAGTGGACTCATCTCTGCTTCTGCAGTCCACACAGAACGTAACTGTAAATGCACGCAACCCGGAGGGAGACGTCACAGGCAGGTCCCAAAATGGTAGAGGTGCAGAGTCAACAGTTTCAGATCAACTCCAAGGACGGCAAGCCACTGTTTACTGGCCTGAAGGGGCTCTTTTTGAACATTCAGTGGAGACGCCCCTCATAAAACCGGACCCAATCCAGGACCTTAGACTAGAATCCCCGACACGGAGTCTCAGCATGGACGCCCCGAAAGGCGTTCATATTCAAGCTGCTGCAGGGAAAATCGAGGCCCTTTCCCAGATGGACATCGTTCTTCACAGCAGTGATGGGACGCTTGTGCTCGATGCTGAAACCGTGTGTTTACCCAAGTTGGCTCAGGGGACTCAGGGTCCCGCAAGCGGCTTGCAGGGACTCTACGAGATCTGTGCGTGTCCAGATGGGAAGCTTTACCTGGCTGTGGCCGGCGTGGGTACCACGTGCCACGAGAACAGTCACATCTGCCTCTAA

Related Sequences

bmy_15222T0 Protein

Length: 272 aa      View alignments
>bmy_15222T0
MVREQYTTTTEGTRVERPENQSVYKIGIYGWRKRCLYLFVLLLLIILLVNFALTIWILKVMWFSPTGMGHLYVTEDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNPEGDVTGRSQNGRGAESTVSDQLQGRQATVYWPEGALFEHSVETPLIKPDPIQDLRLESPTRSLSMDAPKGVHIQAAAGKIEALSQMDIVLHSSDGTLVLDAETVCLPKLAQGTQGPASGLQGLYEICACPDGKLYLAVAGVGTTCHENSHICL*