Part of scaffold_1117 (Scaffold)

For more information consult the page for scaffold_1117 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBTF ENSTTRG00000010500 (Bottlenosed dolphin)

Gene Details

upstream binding transcription factor, RNA polymerase I

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009965, Bottlenosed dolphin)

Protein Percentage 99.08%
cDNA percentage 98.5%
Ka/Ks Ratio 0.05126 (Ka = 0.0042, Ks = 0.0813)

UBTF ENSBTAG00000005067 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034691, Cow)

Protein Percentage 98.41%
cDNA percentage 95.95%
Ka/Ks Ratio 0.03717 (Ka = 0.0072, Ks = 0.1924)

UBTF  (Minke Whale)

Gene Details

upstream binding transcription factor, RNA polymerase I

External Links

Gene match (Identifier: BACU008432, Minke Whale)

Protein Percentage 99.58%
cDNA percentage 99.21%
Ka/Ks Ratio 0.06455 (Ka = 0.0023, Ks = 0.0349)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2739 bp    Location:12435..23429   Strand:+
>bmy_15225
ATGAACGGAGAAGCCGACTGCCCCACAGACCTGGAAATGGCCGCCCCCAAAGGCCAAGACCGCTGGTCCCAGGAAGACATGCTGACTTTGCTGGAATGCATGAAGAACAACCTTCCATCCAATGACAGCTCCAAGTTCAAAACCACCGAGTCACATATGGACTGGGAAAAAGTAGCATTTAAAGACTTTTCTGGAGACATGTGCAAGCTCAAATGGGTGGAGATTTCTAACGAGGTGAGGAAGTTCCGTACGTTGACAGAATTGATCCTCGATGCTCAGGAACATGTTAAAAATCCTTACAAAGGCAAAAAACTCAAGAAACACCCGGACTTCCCAAAGAAGCCTCTGACCCCTTATTTCCGCTTTTTCATGGAGAAGCGGGCCAAGTACGCAAAACTCCACCCCGAGATGAGCAACCTGGACTTGACCAAGATTCTGTCCAAGAAATACAAAGAGCTGCCGGAGAAGAAGAAGATGAAATATATTCAGGACTTCCAGAGGGAGAAACAGGAGTTTGAGCGAAACCTCGCCCGATTCAGGGAGGATCACCCAGACCTAATCCAGAATGCCAAGAAGTCGGACATCCCTGAGAAGCCCAAAACCCCCCAGCAGCTGTGGTACACCCACGAGAAGAAGGTGTACCTCAAAGTGCGGCCAGATGCCACTACGAAGGAGGTGAAGGACTCCCTGGGGAAGCAGTGGTCTCAGCTCTCGGACAAAAAGAGGCTGAAATGGATTCATAAGGCCCTGGAGCAGCGGAAGGAGTACGAGGAGATTATGCGTGACTATATCCAGAAGCACCCCGAGCTCAACATCAGTGAGGAGGGCATCACCAAGTCCACCCTCACCAAGGCCGAACGCCAGCTCAAGGACAAGTTTGACGGGCGACCCACCAAGCCACCTCCGAACAGCTACTCGCTGTACTGCGCAGAGCTGATGGCCAACATGAAGGACGTGCCCAGCACAGAGCGCATGGTGCTGTGCAGCCAGCAGTGGAAGCTGCTCTCCCAGAAGGAGAAGGATGCCTACCACAAGAAGTGCGACCAGAAAAAGAAAGATTATGAGGTGGAACTGCTCCGTTTTCTAGAGAGCCTGCCTGAGGAGGAGCAGCAGCGGGTCCTGGGGGAGGAGAAGATGTTGAACATCAACAAGAAGCAAGCCACCAGCCCAGCCTCCAAGAAGCCCTCCCAGGAAGGGGGCAAGGGTGGCTCGGAGAAGCCCAAGAGGCCCGTGTCAGCCATGTTCATCTTCTCGGAAGAAAAGCGGCGGCAGCTGCAGGAGGAGCGGCCTGAGCTTTCAGAGAGCGAGCTGACCCGCCTGCTGGCCCGCATGTGGAACGACCTGTCAGAGAAGAAAAAGGTCAGGCTTGCCAGACCCGAGGGGCTGCCAGGCAGAGTCTGGGCTGCTTCTCCCCTGGGGGCTAGCTGTACTTCCTCACCCTGCCCCAGGTGTGTGTGGGGTGTGAGCCGCAGGGGTGCCTGGGCGCAGATGGTGGGGCTGGGAACCCAGCGAGCCGGAAGGCGGGAAGCGGTCAGCTGGGGGCTGGGGGCTCCCTGGGGAGCAGGGCCGCTGGGCAGCTTGAGCCCCTGGCAGGAGACATCTGCACCGGCCCACGCCTCTGCTCACCCCACCCTTGCCGGTGGCGGGGAGAGCCTTCAACTGCTGGACGAGCCACGTGCGCCCCCTGGGGGTGGCCGGAAGGCTGACACCTCTGCCGCCCCTCCGCAGGCCAAGTACAAGGCCCGGGAGGCAGCACTGAAGGCCCAGTCAGAGAGGAAGCCAGGCAAGCTGCCAGAGTCGCCCAAAAGAGCCGAGGAGATCTGGCAACAGAGTGTCATCGGCGACTACCTGGCCCGCTTCAAGAACGACCGGGAGAAGGCCTTGAAAGCCATGGAGATGACTTGGAACAACATGGAAAAGAAGGAGAAACTAATGTGGATTAAGAAGGCGGCCGAAGACCAAAAGCGATATGAGAGAGAGCTGAGTGAGAGGCGGGCACCCCCGGCTGCTGCAAACTCATCCAAGAAGATGAAGTTCCAGGGAGAACCCAAGAAGCCTCCTATGAACGGTTACCAGAAGTTCTCCCAGGAGCTTCTGTCCAACGGGCAGCTGAACCACCTGCCACTGAAGGAGCGCATGGTGGAGATTGGCAGCCGCTGGCAGCGCATCTCGCAGAGCCAGAAGGAGCACTACAAGAAGCAGGCCGAGGAGCAGCAGAAGCAGTACAAAGTGCACCTGGACCTCTGGGTCAAGAGTCTGTCTCCCCAGGACCGTGCAGCATATAAAGAGTACATCTCTAATAAACGTAAGAGCATGACCAAGCTGCGAGGCCCGAACCCCAAGTCCAGCCGGACTACCCTGCAGTCTAAGTCGGTAAGGAGCCCCTCTCAGAAAGGGGACCGGGAGCGGGGGTCCGAGGTGCCTGGAGTCGTGTGGCAGGGACCACTGATGTGCTTCCATCCCTCCCAGGAGTCTGAGGATGACGATGAAGAGGATGAAGATGAGGATGATGAGGATGATGAGGAGGAAGATGATGAGAACGGGGACTCCTCTGAGGACGGCGGGGACTCCTCCGAATCCAGCAGCGAGGATGAGAGCGAGGATGGGGATGAGAATGAGGAGGACGACGACGACGAGGACGATGACGAGGACGATGATGAGGATGAGGACAACGAGTCCGAGGGCAGCAGCTCCAGCTCCTCCTCCTCGGGGGACTCCTCGGACTCTGACTCCAACTGA

Related Sequences

bmy_15225T0 Protein

Length: 913 aa      View alignments
>bmy_15225T0
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAFKDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPSQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKVRLARPEGLPGRVWAASPLGASCTSSPCPRCVWGVSRRGAWAQMVGLGTQRAGRREAVSWGLGAPWGAGPLGSLSPWQETSAPAHASAHPTLAGGGESLQLLDEPRAPPGGGRKADTSAAPPQAKYKAREAALKAQSERKPGKLPESPKRAEEIWQQSVIGDYLARFKNDREKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSERRAPPAAANSSKKMKFQGEPKKPPMNGYQKFSQELLSNGQLNHLPLKERMVEIGSRWQRISQSQKEHYKKQAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSVRSPSQKGDRERGSEVPGVVWQGPLMCFHPSQESEDDDEEDEDEDDEDDEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN*