Sequence details bmy_15230 (Coding sequence)

Part of scaffold_1117 (Scaffold)

For more information consult the page for scaffold_1117 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HDAC5 ENSTTRG00000010455 (Bottlenosed dolphin)

Gene Details

histone deacetylase 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009926, Bottlenosed dolphin)

Protein Percentage 98.05%
cDNA percentage 97.29%
Ka/Ks Ratio 0.1259 (Ka = 0.0118, Ks = 0.0936)

HDAC5 ENSBTAG00000016254 (Cow)

Gene Details

histone deacetylase 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053450, Cow)

Protein Percentage 96.51%
cDNA percentage 94.38%
Ka/Ks Ratio 0.08903 (Ka = 0.0202, Ks = 0.2265)

Additional orthologs identified in other species via the OPTIC pipeline.

HDAC5 (Human)   Hdac5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2943 bp    Location:116117..128473   Strand:+
Raw sequence 
>bmy_15230
ATGGCAGCCAGGGCCCGGTGGGGTCTGGGATGGCCCACTGAGCCCTTCCTGTCTCTTCTGCCCGCAGTGGAGGTGAAGCCGGTGCTGCCAGGAGCCATGCCCAGCTCCATGGGGGGCGGGGGAGGAGGCAGCCCCAGCCCCGTGGAGCTGCGGGGTGCGCTGGCAGGCCCCGTGGACCCCGCGCTGCGGGAGCAGCAGCTACAACAGGAGCTCCTGGCGCTCAAGCAGCAGCAGCAGCTGCAGAAGCAGCTCCTGTTCGCTGAGTTCCAGAAGCAGCACGACCACCTGACCCGGCAGCATGAGTCAAAGGAGCCCACACCGGGCGGCCTCAACCATTCCCTCCCACAGCATCCCAAATGCTGGGGAGCCCACCATGCTTCTTTGGACCAGAGTTCCCCTCCCCAGAGCGGCCCCCCTGGGACGCCTCCCTCCTACAAACTGCCTTTGCTTGGGCCCTACGACAGCCGCGATGACTTCCCCCTCCGCAAAACAGCCTCCGAACCCAACTTAAAAGTACGTTCGAGGCTAAAGCAGAAGGTGGCCGAGCGGAGAAGCAGTCCCCTCCTGCGTCGCAAGGACGGGACTGTCATTAGCACCTTTAAGAAGAGAGCTGTTGAGATCACAGGTGCCGGGCCTGGAGCGGCAGCCGTGTGTAACAGCGCGCCAGGCTCCGGCCCCAGCTCTCCTAACAGCTCCCACAGCACCATCGCCGAGAATGGCTTTACTGGCTCAGTCCCCAACATCCCCACCGAGATGCTCCCCCAGCACCGGGCCCTCCCTCTGGACAGCTCCCCCAACCAGTTCAGCCTCTACACGTCTCCCTCTCTGCCCAACATCTCCCTAGGGCTGCAGGCCACGGTCACTGTCACCAACTCGCACCTCACCGCCTCCCCGAAGCTTTCGACGCAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGGTGGTGCACTGACGGGCAAGTTCATGAGCACATCCTCTATCCCCGGCTGCCTGCTGGGCGTGGCACTGGAGGGCGACACCAGCCCCCACGGGCATGCCTCCCTGCTGCAGCATGTGCTGCTGCTGGAGCAGGCCCGGCAGCAGAGCACCCTCATTGCTGTGCCGCTCCACGGGCAGTCCCCGCTGGTGACGGGTGAGCGCGTGGCCACCAGCATGCGGACGGTGGGCAAGCTCCCTCGGCACCGGCCCCTGAGCCGCACTCAGTCCTCGCCGCTGCCCCAGAGCCCCCAGGCCCTGCAGCAGCTGGTCATGCAGCAGCAGCACCAGCAGTTCCTAGAGAAGCAGAAGCAGCAGCAGTTGCAGCTGGGCAAGATCCTCACCAAGACTGGGGAGCTGCCACGGCAGCCCACCACCCACCCCGAGGAGACAGAGGAGGAGCTGACAGAGCAGCAGGAGGCCTTCCTGGGGGAGGGAGCCCTGACCATACCCCGAGAAGGCTCCACGGAGAGTGAGAGCACACAGGAAGACCTGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGGCCCGACTTGGAGGAGTCCAGTGCTGGTTACAAAAAGGTGTTTGCAGATGCTCAGCAGCTGCAGCCGCTGCAGGTGTACCAGGCGCCCCTCAGCCTGGCCACTGTGCCTCACCAGGCCCTGGGCCGCACCCAGTCCTCACCTGCTGCCCCTGGGGGCATGAAGAGCCCCCCGGACCAGCCCACCAAGCACCTCTTCACCACAGGTGTGGTCTACGACACGTTCATGCTGAAGCACCAGTGCATGTGCGGCAACACACACGTGCACCCCGAGCACGCTGGCCGGATCCAGAGCATCTGGTCTCGGCTGCAGGAGACAGGTCTGCTCAGCAAGTGTGAGCGGATCCGGGGTCGCAAAGCCACGCTGGACGAGATCCAGACTGTGCACTCCGAATACCACACCCTGCTCTATGGGACCAGCCCCCTCAACCGACAGAAGCTGGACAGCAAGAAGCTGCTCGGCCCCATCAGCCAGAAGATGTACGCCATGCTGCCTTGTGGGGGCATCGGGGTGGACAGCGATACCGTGTGGAATGAGATGCACTCCTCCAGTGCCGTGCGCATGGCGGTGGGCTGCCTGGTGGAGCTGGCTTTCAAGGTGGCGACGGGGGAGCTCAAGAATGGTTTTGCCATCATCCGGCCCCCGGGACACCACGCGGAGGAATCCACAGCTATGGGATTCTGCTTCTTCAACTCTGTAGCCATCACAACCAAACTCCTGCAGCAGAAGCTGAGTGTGGGCAAGGTTCTCATCGTGGACTGGGACATTCACCACGGCAATGGCACCCAGCAAGCATTCTACAACGACCCCTCCGTGCTCTACATCTCCCTGCATCGCTATGACAATGGGAACTTCTTTCCGGGCTCTGGGGCTCCTGAAGAGGTACAGCTCCTGGGCTCAAACGTTGGCGGAGGGCCGGGCGTGGGGTACAATGTGAACGTGGCATGGACGGGAGGTGTGGATCCCCCCATCGGAGACGTGGAGTACCTAACGGCCTTCAGGACAGTGGTGATGCCCATTGCCCACGAGTTCTCACCTGACGTGGTCCTGGTCTCCGCCGGGTTTGATGCTGTTGAGGGACACCTGTCTCCGCTGGGTGGCTACTCTGTGACCGCCAGATGTGAGCCTCTGCAGCCCTTGGACGAGGCAGTCTTGCAACAAAAGCCCAACGTCAACGCAGTGGCCACGCTAGAGAAAGTCATCGAGATCCAGAGCAAACACTGGAGCTGTGTGCAGAGGTTCGCTGCTGGTCTAGGCCGTTCCCTGCGGGAGGCCCAGGCAGGTGAGACAGAGGAGGCTGAGACTGTGAGCGCCATGGCCTTGCTGTCGGTGGGGGCCGAGCAGGCCCAGGCTGCTGCAGGCCGGGAGCACAGCCCCAGGCCGGCAGAGGAGCCCATGGAGCAGGAGCCTGCCCTGTGA

Related Sequences

bmy_15230T0 Protein

Length: 981 aa      View alignments
>bmy_15230T0
MAARARWGLGWPTEPFLSLLPAVEVKPVLPGAMPSSMGGGGGGSPSPVELRGALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHESKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGAGPGAAAVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGALTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQEAFLGEGALTIPREGSTESESTQEDLEEEEEEEEEEEEEEEGPDLEESSAGYKKVFADAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGGMKSPPDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVATGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVQLLGSNVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCEPLQPLDEAVLQQKPNVNAVATLEKVIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAGREHSPRPAEEPMEQEPAL*