Part of scaffold_1106 (Scaffold)

For more information consult the page for scaffold_1106 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX10 ENSTTRG00000000713 (Bottlenosed dolphin)

Gene Details

sorting nexin 10

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000672, Bottlenosed dolphin)

Protein Percentage 92.17%
cDNA percentage 92.97%
Ka/Ks Ratio 0.2773 (Ka = 0.0281, Ks = 0.1012)

SNX10 ENSBTAG00000001822 (Cow)

Gene Details

Sorting nexin-10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002383, Cow)

Protein Percentage 96.41%
cDNA percentage 94.61%
Ka/Ks Ratio 0.08258 (Ka = 0.0162, Ks = 0.1957)

SNX10  (Minke Whale)

Gene Details

sorting nexin 10

External Links

Gene match (Identifier: BACU003768, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.4%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0188)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 702 bp    Location:508540..481391   Strand:-
>bmy_15249
ATGTTCACCTTGGTTGGGTCAGCAGGAGACAGGGTGGTGGAGAAGCATAGATCGATCGTGTCCTGTGTTGAAGATGTTTCCAGAACAGCAGAAAGAGGATTACAACCACATTGGTTAAAGCTCATTTCAGTTTTGTTCTTGGACAGTCGTTTCTCTCAGCCCTTCTTAGCCCTACTTGCGATTCTGAAACCTGTTTCTTTGCTTGTGATGCCCTTACAGGAATTTGTAAGTGTTTGGGTTCGAGATCCTAGGATTCAGAAGGAGGACTTCTGGCATTCTTATATTGACTATGAGATATGTATTCATACCAATAGCATGTGTTTTACAATGAAAACATCCTGTGTACGAAGAAGATATAGAGAATTTGTGTGGCTGAGGCAGAGACTCCAAAGTAATGCATTACTGGTGGTCCTACAGAATGCACTTCTGCTTTCAGATAGCAGCCTTCACCTCTTCCTGCAAAGCCATCTGAATTCAGAAGACATCGAGGCATGTGTTTCCGGGCAGACTAAGTACTCCGTAGAAGAAGCAATTCACAAGTTTGCCTTGATGAACAGACGTTTCCCTGAAGAAGAAGAAGAAGGAAAAAAAGAAAATGATATAGATTATGATTCGGAAAGTTCATCCTCTGGGTTTGGACACAGTAGTGATGACAGCAGTTCACACGGATGTAAAATGAGCACAGCTCTGCAGGAATCCTGA

Related Sequences

bmy_15249T0 Protein

Length: 234 aa      View alignments
>bmy_15249T0
MFTLVGSAGDRVVEKHRSIVSCVEDVSRTAERGLQPHWLKLISVLFLDSRFSQPFLALLAILKPVSLLVMPLQEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVVLQNALLLSDSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHKFALMNRRFPEEEEEGKKENDIDYDSESSSSGFGHSSDDSSSHGCKMSTALQES*