Sequence detailsbmy_15260 (Coding sequence)

Part of scaffold_1127 (SequenceType object (1))

For more information consult the page for scaffold_1127 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNRPD3ENSTTRG00000006022 (Bottlenosed dolphin)

Gene Details

small nuclear ribonucleoprotein D3 polypeptide 18kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005679, Bottlenosed dolphin)

Protein Percentage 86.51%
cDNA percentage 87.83%
Ka/Ks Ratio 0.47266 (Ka = 0.1097, Ks = 0.2321)

BT.28460ENSBTAG00000021262 (Cow)

Gene Details

small nuclear ribonucleoprotein Sm D3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028330, Cow)

Protein Percentage 86.51%
cDNA percentage 78.84%
Ka/Ks Ratio 0.05996 (Ka = 0.1019, Ks = 1.6999)

Additional orthologs identified in other species via the OPTIC pipeline.

SNRPD3 (Human)   Snrpd3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 408 bp    Location:105154..95830   Strand:-
Raw sequence 
>bmy_15260
ATGTCTATTGGCGTACCGATTAAAGTCCTACATGAGGCTGAGGGTCACATCGTGACATGTGAGACAAACACTGGTGAGGTGTATCGAGGGAAGCTCATTGAAGCAGAGGACAACATGAACTGCCAGATGTCCAACATCACAGTCACATACAGAGATGGCCGAGTGGCACAGCTGGAGCAGGTGTACATCCGTGGCAGCAAGATCCGCTTTCTGATTTTGCCTGACATGCTGAAAAACGCACCCATGTTAAAGAGCATGAAAAATAAAAACCAAGGCTCGGGGGCCGGTCGGGGAAAGGCTGCTATTCTGAAGGCCCAAGTCTTGGGGGATCCAAGTACCCTGCCTTCTCTGTCTGCCTCACCTGATCCCATTCACAGGAGTTATGCAAAATCCAAAGTGGCTCCTTAG

Related Sequences

bmy_15260T0 SequenceType object (3)

Length: 136 aa      View alignments
>bmy_15260T0
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVLGDPSTLPSLSASPDPIHRSYAKSKVAP*