Part of scaffold_1127 (SequenceType object (1))

For more information consult the page for scaffold_1127 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPECC1LENSTTRG00000014673 (Bottlenosed dolphin)

Gene Details

sperm antigen with calponin homology and coiled-coil domains 1-like

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013919, Bottlenosed dolphin)

Protein Percentage 99.24%
cDNA percentage 98.93%
Ka/Ks Ratio 0.14348 (Ka = 0.0047, Ks = 0.0324)

SPECC1LENSBTAG00000021656 (Cow)

Gene Details

cytospin-A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000029400, Cow)

Protein Percentage 91.77%
cDNA percentage 87.57%
Ka/Ks Ratio 0.06408 (Ka = 0.0401, Ks = 0.6263)

SPECC1L (Minke Whale)

Gene Details

sperm antigen with calponin homology and coiled-coil domains 1-like

External Links

Gene match (Identifier: BACU017162, Minke Whale)

Protein Percentage 99.01%
cDNA percentage 99.15%
Ka/Ks Ratio 0.41871 (Ka = 0.0064, Ks = 0.0153)

Genome Location

Sequence SequenceType object (2)

Length: 2115 bp    Location:316128..297839   Strand:-
>bmy_15265
ATGAAGAAAACAAGCAGGAGTGTTGGCTCAGTGCCTAAGGTGTCTGGGATAAGCAAATCTCAAACAGCAGACAAAACGAAACCCGAAAACAGCTCTTCAGCATCTGCAGGAGGCAAACTCGTAAAGCCTGGAACAGCAGCTTCGTTGTCAAAGACCAAGAGCAGTGATGACCTTTTAGCTGGGATGGCTGGAGGGGTGACTGTGACTAATGGTGTCAAAGGGAAGAAAAGCACCTGCCCTTCCGCAGCACCGTCAGCATCCGCCCCTGCCATGAGCACCATGGAGAACAGACCCAAGAGTAGCACAGGTAATAAAGAATCCAGTTCTACTAGAGAAAGATTACGTGAACGTACCCGACTAAACCAGAGCAAAAAACTACCTTCTGCAGGTCAGGGGGCTAATGACATGGCGTTGGCTAAACGTTCCCGCAGTCGCACGGCTACGGAATGCGACATTCGTATGAGCAAGTCCAAATCGGACAATCAGATCAGTGACAAAGCTGCTCTGGAAGCCAAAGTGAAGGATCTTCTCACATTGGCAAAAACCAAAGACGTGGAGATTTTACATTTGAGGAATGAACTCCGTGACATGCGTGCTCAGCTGGGCATTAACGAGGACCCTCCTGAGGGGGATGAGAAGTCCGAGAAGGAAGCCGTCATTGTTCACCAGCCCACTGACGTCGAGTCCACTTTATTGCAGTTACAGGAACAGAATACTGCCATCCGCGAGGAGCTCAACCAGCTGAAAAATGAAAACAGAATGCTAAAGGACAGGTTGAACGCACTGGGCTTCTCCCTGGAGCAGAGGCTAGACCATTCTGAAAAACTGTTTGGCTATCAGTCCCTGAGCCCAGAGATCACCCCTGGTAACCAGAGCGATGGAGGGGGGACTCTGACTTCCTCGGTGGAGGGCTCTGCCCCTGGGTCAGTGGAGGATCTCCTGAGCCAGGATGAAAACACCCTCATGGACCATCAGCACAGTAACTCTATGGACAACCTGGACAGCGAGTGCAGCGAGGTGTACCAGCCCCTCACGTCCAGCGATGACGCCCTGGACGCACCGTCGTCCTCGGAGTCAGAAGGCATTCCGAGCATAGAGCGCTCTCGGAAGGGGAGCAGCGGGAACGCCAGCGAAGTGTCCGTCGCTTGTTTGACGGAACGGATACACCAGATGGAGGAGAACCAACACAGTACGAGTGAGGAACTTCAGGCGACTCTGCAAGAGCTCGCTGATCTACAGCAGATCACCCAGGAGCTGAACAGTGAAAACGAAAGGCTCGGAGAGGAGAAGGTGATTCTCATGGAGTCGTTATGTCAGCAAAGCGATAAGTTGGAACACTTCAGCCGACAGATCGAATATTTCCGCTCCCTTCTAGATGAGCATCACATTTCCTATGTCATTGACGAAGATGTAAAAAGTGGACGCTACATGGAACTGGAGCAGCGCTACATGGATCTAGCTGAGAACACCCGTTTTGAACGGGAGCAGCTTCTTGGCGTCCAGCAGCATTTAAGCAATACTTTGAAGATGGCTGAGCAAGACAACAAGGAAGCTCAGGAGATGATCGGGGCACTCAAGGAGCGCAACCACCACATGGAGCGAATCGTTGAGTCTGAGCAGAAGGGCAAGGCCGCCTTGGCAGCCACGCTGGAGGAGTTCAAAGCCACAGTGGCCAGTGACCAGATCGAGATGAATCGCCTGAAGGCCCAGCTGGAGAACGAGAAGCAGAAAGTGGCGGAGCTGTATTCCATCCATAACTCCGGAGACAAGTCTGACATTCAGGATCTCCTGGAGAGTGTCAGGCTGGACAAAGAAAAAGCAGAGACTCTGGCCAGTAGCCTGCAGGAAGATCTGGCTCACACCCGGAATGATGCCAATCGATTGCAGGACACCATCGCAAAGGTAGAAGATGAATACAGAGCCTTCCAAGAAGAAGCTAAGAAGCAAATAGAAGATCTGAATATGACATTAGAAAAATTAAGATCAGAGCTGGAAGAAAAAGAGACAGAAAGGAGTGACATGAAAGAAACGATCTTTGAACTTGAAGACGAAGTAGAACAGCACCGGGCGGTGAAGCTTCATGACAACCTCATCATCTCCGACTTAGAGAGTAAG

Related Sequences

bmy_15265T0 SequenceType object (3)

Length: 705 aa      View alignments
>bmy_15265T0
MKKTSRSVGSVPKVSGISKSQTADKTKPENSSSASAGGKLVKPGTAASLSKTKSSDDLLAGMAGGVTVTNGVKGKKSTCPSAAPSASAPAMSTMENRPKSSTGNKESSSTRERLRERTRLNQSKKLPSAGQGANDMALAKRSRSRTATECDIRMSKSKSDNQISDKAALEAKVKDLLTLAKTKDVEILHLRNELRDMRAQLGINEDPPEGDEKSEKEAVIVHQPTDVESTLLQLQEQNTAIREELNQLKNENRMLKDRLNALGFSLEQRLDHSEKLFGYQSLSPEITPGNQSDGGGTLTSSVEGSAPGSVEDLLSQDENTLMDHQHSNSMDNLDSECSEVYQPLTSSDDALDAPSSSESEGIPSIERSRKGSSGNASEVSVACLTERIHQMEENQHSTSEELQATLQELADLQQITQELNSENERLGEEKVILMESLCQQSDKLEHFSRQIEYFRSLLDEHHISYVIDEDVKSGRYMELEQRYMDLAENTRFEREQLLGVQQHLSNTLKMAEQDNKEAQEMIGALKERNHHMERIVESEQKGKAALAATLEEFKATVASDQIEMNRLKAQLENEKQKVAELYSIHNSGDKSDIQDLLESVRLDKEKAETLASSLQEDLAHTRNDANRLQDTIAKVEDEYRAFQEEAKKQIEDLNMTLEKLRSELEEKETERSDMKETIFELEDEVEQHRAVKLHDNLIISDLESK