Part of scaffold_1127 (Scaffold)

For more information consult the page for scaffold_1127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RTDR1 ENSTTRG00000009063 (Bottlenosed dolphin)

Gene Details

rhabdoid tumor deletion region gene 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008576, Bottlenosed dolphin)

Protein Percentage 61.62%
cDNA percentage 71.09%
Ka/Ks Ratio 0.41717 (Ka = 0.2533, Ks = 0.6072)

BT.51155 ENSBTAG00000036113 (Cow)

Gene Details

rhabdoid tumor deletion region protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000052597, Cow)

Protein Percentage 70.14%
cDNA percentage 76.26%
Ka/Ks Ratio 0.17698 (Ka = 0.2056, Ks = 1.1616)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 837 bp    Location:529865..540143   Strand:+
>bmy_15270
ATGGAGACTCCCACGTCTCCACGGTTACTGCTCATGAACGTCCACGCCCCAAAGGGACAGAGCCACCAGCTCAACATCATCCTCCATGCTGGCCAGGAAGGAGGCCAGGGGTTGGTTACCCAGGACCCTGGCCCTGCCTGGAAGGGCGGTCCTAGGCTGCGAGCAGCCCTCGGGGTCTTCCCGGCTCTTCTCCAGGCCCACTCGGTTCTGGGTCACGGAGCTGCTCTTTGCACAGGGGCCAAGGGCATTGTCAACAGCAGCCTGATCCCCTCGCTGGTGTGGAAGCTGCAGAGGGAGGAGGAAGGGATCCAGGAGCTCCTCCTGGACACGCTGGCCGCCTGCCTGATGGAGGACGCCACCGAGGCACTGGCCAGCCAGGCGGTGCCCTTCCTGAAGGAGAAGCTCCTGAGCGCCAACAGCAACATCCGCAGCAAAGCCGCCCAAGCACTAATCGCAGTCAGCATCCCCCTGGAGGGCAAGAACCAGGTGTGGCAGCACGACGTCATCCCCATCCTGGTGCACCTGCTGAAGGACAAGGAAGAGGAGGTGCAGGCCAATGCAGCTGGGGCCCTCATGTACGTCACAGTGACCACCGAAGGGAAGTACGCGGCCCTGGACGCGGAGGCCATCCGTCCGCTGCTGGAGCTACTGCACTCATCCTTGAGCAAGGCGCGCCTCAATGCCATCAAGGTCCTCACCATGCTGGCCGAGGCCCCTGAGGGCCGCAAGCTCCTGCAGTCCCACGTGCCCACCTTCCGGGCCCTCGAGGAGGACACCAGCGCGGCTGTGCAGCGGGCAGCCCAGATCGCCGTCAAAGTCATTGAGTGGAAACCCTGA

Related Sequences

bmy_15270T0 Protein

Length: 279 aa      View alignments
>bmy_15270T0
METPTSPRLLLMNVHAPKGQSHQLNIILHAGQEGGQGLVTQDPGPAWKGGPRLRAALGVFPALLQAHSVLGHGAALCTGAKGIVNSSLIPSLVWKLQREEEGIQELLLDTLAACLMEDATEALASQAVPFLKEKLLSANSNIRSKAAQALIAVSIPLEGKNQVWQHDVIPILVHLLKDKEEEVQANAAGALMYVTVTTEGKYAALDAEAIRPLLELLHSSLSKARLNAIKVLTMLAEAPEGRKLLQSHVPTFRALEEDTSAAVQRAAQIAVKVIEWKP*