Sequence detailsbmy_15278 (Coding sequence)

Part of scaffold_1131 (SequenceType object (1))

For more information consult the page for scaffold_1131 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLCN3ENSTTRG00000009733 (Bottlenosed dolphin)

Gene Details

chloride channel, voltage-sensitive 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009233, Bottlenosed dolphin)

Protein Percentage 86.78%
cDNA percentage 85.47%
Ka/Ks Ratio 0.12041 (Ka = 0.0111, Ks = 0.0924)

CLCN3ENSBTAG00000020130 (Cow)

Gene Details

H(+)/Cl(-) exchange transporter 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026813, Cow)

Protein Percentage 97.58%
cDNA percentage 87.27%
Ka/Ks Ratio 0.02055 (Ka = 0.0141, Ks = 0.6871)

Additional orthologs identified in other species via the OPTIC pipeline.

CLCN3 (Human)   Clcn3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1617 bp    Location:132590..99815   Strand:-
Raw sequence 
>bmy_15278
ATGACAAACGGAGGCAGCATCAGCAGTTCCACCCACCTGCTGGACCTTCTGGATGAACCCATCCCCGGCGTTGGTACCTATGACGATTTCCACACCATTGATTGGGTGCGGGAGAGATGTAAAGACAGGGAAAGGCACAGACGGATCAACAGCAAAAAGAAAGAATCAGCATGGGAAATGACAAAAAGTTTGTATGATGCGTGGTCAGGATGGCTAGTAGTAACACTAACAGGATTGGCATCAGGGGCATTGGCTGGTTTAATAGACATCGCCGCCGACTGGATGACTGACCTCAAGGAGGGCATCTGCCTTAGCGCACTGTGGTACAACCACGAACAGTGTTGCTGGGGGTCTAATGAAACCACATTTGAGGAGAGGGATAAATGTCCACAGTGGAAAACATGGGCGGAATTAATCATAGGGCAAGCGGAGGGTCCTGGTTCATACATCATGAACTACATAATGTACATCTTCTGGGCCTTGAGTTTCGCCTTTCTTGCCGTTTCCCTGGTGAAGGTGTTTGCTCCATATGCCTGTGGCTCTGGGATTCCAGAGATTAAAACTATTTTGAGTGGATTCATCATCAGAGGCTACTTGGGAAAATGGACTTTAATGATTAAAACCATCACATTAGTACTGGCTGTGGCATCAGGTTTGAGTTTAGGAAAAGAAGGGCCCTTGGTMCACGTTGCCTGTTGCTGTGGAAATATCTTTTCCTACCTCTTTCCGAAGTACAGCACAAATGAAGCTAAGAAAAGAGAGGTGCTATCAGCTGCCTCAGCTGCAGGTGTTTCTGTAGCTTTTGGTGCACCGATCGGAGGAGTTCTTTTCAGCCTGGAAGAGGTTAGCTATTATTTTCCTCTAAAAACTTTATGGAGATCGTTTTTTGCTGCTTTAGTGGCTGCATTTGTTTTGAGATCCATCAATCCATTTGGTAATAGCCGTCTGGTCCTTTTTTATGTGGAGTATCATACACCGTGGTACCTTTTTGAACTGTTTCCTTTTATTCTCCTCGGGGTATTTGGAGGGCTGTGGGGAGCCTTTTTCATTAGGGCAAATATTGCCTGGTGTCGCCGACGCAAATCCACCAAGTTTGGAAAGTATCCTGTTCTCGAGGTCATCATTGTTGCAGCCATCACTGCTGTGGCAGCCTTCCCTAATCCCTACACGAGGCTCAACACCAGCGAACTGATTAAAGAGCTTTTCACAGACTGCGGCCCCCTGGAATCCTCTTCTCTCTGTGACTACAGAAATGACATGAACGCCAGTAAAATCGTTGATGATATTCCTGATCGTCCAGCAGGCCTTGGAGTATATTCAGCTATATGGCAGTTATGCTTGGCACTCATATTTAAAATCATAATGACAGTGTTCACTTTTGGTATCAAGGTCCCGTCGGGCTTGTTCATCCCCAGCATGGCCATCGGCGCGATCGCTGGCCGCATCGTGGGCATCGCAGTGGAGCAGCTGGCCTACTATCACCACGACTGGTTCATCTTCAAGGAGTGGTGTGAGGTCGGGGCCGACTGCATCACCCCCGGCCTTTACGCCATGGTCGGCGCGGCCGCCTGCTTAGGTAACGGGGCCCTGCGCATGCGCGCGTGTGTCTGTGCCTGA

Related Sequences

bmy_15278T0 SequenceType object (3)

Length: 539 aa      View alignments
>bmy_15278T0
MTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVRERCKDRERHRRINSKKKESAWEMTKSLYDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGICLSALWYNHEQCCWGSNETTFEERDKCPQWKTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTKFGKYPVLEVIIVAAITAVAAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFKEWCEVGADCITPGLYAMVGAAACLGNGALRMRACVCA*