Part of scaffold_1131 (Scaffold)

For more information consult the page for scaffold_1131 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SH3RF1 ENSTTRG00000006812 (Bottlenosed dolphin)

Gene Details

SH3 domain containing ring finger 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006448, Bottlenosed dolphin)

Protein Percentage 69.02%
cDNA percentage 69.88%
Ka/Ks Ratio 0.37755 (Ka = 0.0901, Ks = 0.2388)

BT.44357 ENSBTAG00000001508 (Cow)

Gene Details

E3 ubiquitin-protein ligase SH3RF1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001976, Cow)

Protein Percentage 80.55%
cDNA percentage 82.85%
Ka/Ks Ratio 0.17739 (Ka = 0.1155, Ks = 0.651)

SH3RF1  (Minke Whale)

Gene Details

SH3 domain containing ring finger 1

External Links

Gene match (Identifier: BACU015216, Minke Whale)

Protein Percentage 89.07%
cDNA percentage 90.72%
Ka/Ks Ratio 0.41959 (Ka = 0.0778, Ks = 0.1854)

Genome Location

Sequence Coding sequence

Length: 1755 bp    Location:600632..643047   Strand:+
>bmy_15283
ATGGAGTTTAACTCGGCGGCCAAGCAGCTGATCGAGTGGGACCAGCCTCCTGCGGGGGGCGTTGGCGCTGGGGAGGGCGCCCCGGCCGCTGCCCCGAGCAGCGCGGCCCCCAAGCAGCCCGAAGCCAAGAAGAACACGAAGAAGCGGCACTCGTTCACCTCCCTGACCACGGCCAGCAAGGCGTCGCAGGCCACCCAGCAGCGCCACTCCATGGAGATCAGCCCCCCGGTCCTCATCAGCTCCAGCAACCCCACGGCCGCCGCGCGCATCGGCGAGCTGGCCGGGCTCTCGTGCAGCGCCCCCTCTCAGGTCCACATAAGTACCACCGGGTTGATTGTGACCCCACCCCCGAGCAGCCCAGTGACCACCGGCCCCTCGTCCACGGTCCCGCCAGAGGCCCCCTACCCGGCTGCCCTTTCGGTGAGTGTGCACCACCGCCTCACCCCGGACCCCCGTGCCTGCCGCTCGCAGACCAGGCGTATTTATCGAAGTACTGAGGGAGCTGGGATCCTAGAGGCCGTATGCTTGAAATCRACTGTTTTTTCCTCTTCTAGGTATGTTGCCATTTATCCCTACACCCCCCGGAAAGAGGATGAGCTGGAGCTGAGGAAGGGGGAGATGTTTCTCGTGTTTGAGCGCTGCCAGGACGGCTGGTTCAAGGGCACGTCCATGCACACCAGCAAGATAGGGGTCTTCCCTGGCAATTACGTGGCCCCCGTCACGAGGGCAGTGACCAGTGCTTCCCAGGGTAAAGTCCCCGTGTCGACCGCTGGCCAGACAAGTCGAGGGGGGGGACCGGCCAGCCCTTCCCCCGCAGGAGCGCCTGCCCAGAAGCCCCCGGGGAACGGCATGGCCGGCGGTCCCGGGGTCCCCACTGCCGTGGTGTCAGCAGCTCACATCCAGACGAGTCCCCAGGCCAAGGTCCTGCTGCACATGTCCGGACAGATGACCGTCAACCAGGCGCGCAGCTCTGTGAGGACAGTCTCAGCACACAGCCAGGAGCGCCCCACGGCGGCCGTGACGCCCATCCAGGTTCAGAGCGCCGCGGGGCTGCCCCATCACCCCCTGGCCTCGCCCCAGCCCCCCGGCCCGATGGGCCCTCCTGCCCACGTGGCTGCTGGCAGCCTGGGCCGGGTCGGCGCCTCCCTGGCCTGCGCTGCGGCCCCGCCGAGCCTCCCCGCCGCCTCCCTGGAGACCGAGCCCGGCGGTCGCCCAGTGACCATGCTCCCCGGGCCGCCCACCTCTCCTGACAGCGGCTCAGCGGCCAAGCCAGACAAGGACAGCAAGAAAGAGAGAAAGGGGCTGTTGAAGCTGCTCTCCGGGGCCTCCACCAAGCGCAAGCCGCGGGGGTCGCCGCCAGCCTCGCCCACCCTGGACGTCGAGCCGGGGGCCGAGCTGCTGCCCGGGGCCCCCGGCGCCCCCTGCGCCTGCCCCGGGCCCTGTGATGCCGACCCCCCGGCCCCGGCCCCTGGCCCGCAGCGCCGGACCTGCTCCCTGGACTCGGCCCCGGTGGCGCCACCGCCGCGGCAGCCCTGCTCGTCCCTGGGCCCGGCGGCCGGTGACGCGAGGCCTGCGGTCTGTGAAAGGCACCGGGTGGTGGTTTCCTACCCCCCGCAGAGTGAGGCAGAACTGGAACTCAAGGAGGGCGACATCGTGTTTGTGCACAGGAAGCGGGAGGACGGCTGGTTCAAGGGCACGCTGCAGCGGAACGGGAAGACGGGCCTCTTCCCCGGGAGCTTCGTGGAAAACATCTGA

Related Sequences

bmy_15283T0 Protein

Length: 585 aa      View alignments
>bmy_15283T0
MEFNSAAKQLIEWDQPPAGGVGAGEGAPAAAPSSAAPKQPEAKKNTKKRHSFTSLTTASKASQATQQRHSMEISPPVLISSSNPTAAARIGELAGLSCSAPSQVHISTTGLIVTPPPSSPVTTGPSSTVPPEAPYPAALSVSVHHRLTPDPRACRSQTRRIYRSTEGAGILEAVCLKSTVFSSSRYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTSASQGKVPVSTAGQTSRGGGPASPSPAGAPAQKPPGNGMAGGPGVPTAVVSAAHIQTSPQAKVLLHMSGQMTVNQARSSVRTVSAHSQERPTAAVTPIQVQSAAGLPHHPLASPQPPGPMGPPAHVAAGSLGRVGASLACAAAPPSLPAASLETEPGGRPVTMLPGPPTSPDSGSAAKPDKDSKKERKGLLKLLSGASTKRKPRGSPPASPTLDVEPGAELLPGAPGAPCACPGPCDADPPAPAPGPQRRTCSLDSAPVAPPPRQPCSSLGPAAGDARPAVCERHRVVVSYPPQSEAELELKEGDIVFVHRKREDGWFKGTLQRNGKTGLFPGSFVENI*