Part of scaffold_1122 (Scaffold)

For more information consult the page for scaffold_1122 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HADH ENSTTRG00000008088 (Bottlenosed dolphin)

Gene Details

hydroxyacyl-CoA dehydrogenase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007654, Bottlenosed dolphin)

Protein Percentage 98.52%
cDNA percentage 97.79%
Ka/Ks Ratio 0.15063 (Ka = 0.0089, Ks = 0.0589)

BT.58717 ENSBTAG00000002049 (Cow)

Gene Details

hydroxyacyl-coenzyme A dehydrogenase, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002654, Cow)

Protein Percentage 90.04%
cDNA percentage 91.39%
Ka/Ks Ratio 0.21695 (Ka = 0.0504, Ks = 0.2324)

HADH  (Minke Whale)

Gene Details

hydroxyacyl-CoA dehydrogenase

External Links

Gene match (Identifier: BACU014395, Minke Whale)

Protein Percentage 98.89%
cDNA percentage 98.77%
Ka/Ks Ratio 0.18384 (Ka = 0.0054, Ks = 0.0295)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 816 bp    Location:248715..224487   Strand:-
>bmy_15292
CAGGTTGCTGCAGCAACTGGCCACACAGTAGTGTTGGTGGACCAAACAGAGGACATCCTGGCAAAATCTAGAAAGGGAATTGAGGAAAGCCTTCGGAAAGTGGCCAAGAAGAAGTTTGCAGAAAACCCCAAGGCTGGCGATGAGTTCATGGAGAAGACCCTGAGCAGCATACTGACCAGCGTGGACGCAGCGTCCGTGGTCCACAGCACAGACCTGGTGGTGGAGGCCATCGTAGAGAATCTGAAGGTGAAGAGCGAGCTCTTCAAGAGGCTGGACAAGTTTGCTGCCGAACACACAATCTTTGCCAGCAACACTTCCTCTTTGCAGATCACAAGCATAGCCAATGCCACCACCAGACAGGACCGATTTGCTGGGCTCCATTTCTTCAACCCAGTGCCCCTGATGAAACTTGTGGAGGTCATTAAAACACCAATGACCAGCCAGAAGACCTTTGAATCTCTGGTAGACTTCAGCAAAACCCTGGGAAAGCATCCTGTTGCTTGCAAGGATACTCCCGGGTTTATTGTGAACCGTCTCCTGGTGCCATACCTCATGGAAGCAGTCAGGCTGTATGAACGAGGTGACGCATCCAAGGAAGACATCGATACTGCTATGAAGCTGGGCGCTGGGTACCCCATGGGCCCATTCGAGCTTCTCGATTATGTTGGGCTGGATACTACGAAGTTCATCATGGATGGATGGCATGAAATGGATACAAAGAACCCCTTGTTCCAGTCCAGCCCATCCATGAATAAGCTGGTAGCAGAGAATAAGCTTGGCAAGAAGACTGGAGAAGGATATTACAAATACAAGTGA

Related Sequences

bmy_15292T0 Protein

Length: 272 aa      View alignments
>bmy_15292T0
QVAAATGHTVVLVDQTEDILAKSRKGIEESLRKVAKKKFAENPKAGDEFMEKTLSSILTSVDAASVVHSTDLVVEAIVENLKVKSELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPLMKLVEVIKTPMTSQKTFESLVDFSKTLGKHPVACKDTPGFIVNRLLVPYLMEAVRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIMDGWHEMDTKNPLFQSSPSMNKLVAENKLGKKTGEGYYKYK*