Part of scaffold_1122 (Scaffold)

For more information consult the page for scaffold_1122 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGMS2 ENSTTRG00000008049 (Bottlenosed dolphin)

Gene Details

sphingomyelin synthase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007611, Bottlenosed dolphin)

Protein Percentage 85.21%
cDNA percentage 84.93%
Ka/Ks Ratio 0.13231 (Ka = 0.0034, Ks = 0.0257)

SGMS2 ENSBTAG00000016805 (Cow)

Gene Details

phosphatidylcholine:ceramide cholinephosphotransferase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022353, Cow)

Protein Percentage 98.36%
cDNA percentage 93.42%
Ka/Ks Ratio 0.03413 (Ka = 0.0082, Ks = 0.2398)

SGMS2  (Minke Whale)

Gene Details

sphingomyelin synthase 2

External Links

Gene match (Identifier: BACU014393, Minke Whale)

Protein Percentage 87.68%
cDNA percentage 89.61%
Ka/Ks Ratio 0.83583 (Ka = 0.1089, Ks = 0.1303)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1152 bp    Location:337775..310803   Strand:-
>bmy_15294
ATGTGTGTTATTTCCAAGTCACTGCTAAAGAAGTGCTCAGCTGACCGGAGGACAATGGATATCATAGAGACAGCAAAACTTGAAGAACATATGGAAAACCAAACCAACGATCCTGCAAACACTTAYGCAAGACCTGCTGAACCTGTTGAAGAAGAGAACAAAAATGGCAATGGTAAACCTAAGAGTTTATCCAATGGGCTGCGAAAGGGCACCAAAAAGTACCCGGACTATATCCAAATTGCTATGCCCACGGAATCGAGGAACAAATTTCCCCTAGAGTGGTGGAAAACGGGCATTGCCTTCGTGTACGCTCTTTTCAACCTCGTCCTGACAACCGTCATGATCACGGTTGTGCACGAGAGGGTCCCTCCCAAGGAGCTCAGCCCTCCACTCCCAGACAAGTTTTTTGATTACATAGATCGGGTGAAATGGGCATTTTCTGTATCAGAAATAAATGGAATTATATTAGTTGGATTATGGATCACCCAGTGGCTATTTCTGAGATACAAGTCAATAGTGGGGCGCAGATTCTTTTTTATCATTGGAACTTTGTACCTGTATCGCTGTATCACGATGTACGTTACTACTCTCCCTGTGCCTGGAATGCATTTCCAGTGTGCTCCAAAGCTCAACGGAGACTCTCAGGCAAAAGTACAACGGATTCTACGGTTGATTTCTGGTGGCGGATTGTCCATAACTGGGTCGCATATCTTGTGTGGAGACTTTCTCTTCAGCGGCCACACAGTTGTGCTGACACTTACTTATTTGTTCATCAAAGAATATTCGCCTCGTCACTTCTGGTGGTATCATTTAATCTGCTGGCTGCTGAGCGCTGCTGGGATCGTCTGCATTCTTGTAGCACACGAACACTATACTGTCGATGTGATCGTTGCTTATTATATCACAACACGGCTCTTTTGGTGGTACCATTCCATGGCCAATGAAAAGAACTTGAAGGTCTCTTCACAGACTAATTTCTTGTCTCGAGCATGGTGGTTCCCCATCTTTTATTTTTTTGAGAAAAACGTACAAGGCTCAATTCCTTGCTGCTTCTCCTGGCCACTGTCCTGGCCTCCTGGCTGCTTTAAATCGTCTTGCAAGAAGTATTCACGGGTTCAGAAGATCGGTGAAGATAATGAAAAATCTACCTGA

Related Sequences

bmy_15294T0 Protein

Length: 384 aa      View alignments
>bmy_15294T0
MCVISKSLLKKCSADRRTMDIIETAKLEEHMENQTNDPANTYARPAEPVEEENKNGNGKPKSLSNGLRKGTKKYPDYIQIAMPTESRNKFPLEWWKTGIAFVYALFNLVLTTVMITVVHERVPPKELSPPLPDKFFDYIDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFFFIIGTLYLYRCITMYVTTLPVPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVVLTLTYLFIKEYSPRHFWWYHLICWLLSAAGIVCILVAHEHYTVDVIVAYYITTRLFWWYHSMANEKNLKVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGEDNEKST*