Part of scaffold_1115 (Scaffold)

For more information consult the page for scaffold_1115 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TANK ENSTTRG00000006618 (Bottlenosed dolphin)

Gene Details

TRAF family member-associated NFKB activator

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006260, Bottlenosed dolphin)

Protein Percentage 96.87%
cDNA percentage 98.43%
Ka/Ks Ratio 3.06349 (Ka = 0.0188, Ks = 0.0061)

TANK ENSBTAG00000006654 (Cow)

Gene Details

TRAF family member-associated NF-kappa-B activator

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043495, Cow)

Protein Percentage 90.82%
cDNA percentage 94.83%
Ka/Ks Ratio 0.6975 (Ka = 0.0491, Ks = 0.0704)

TANK  (Minke Whale)

Gene Details

TRAF family member-associated NFKB activator

External Links

Gene match (Identifier: BACU010074, Minke Whale)

Protein Percentage 98.12%
cDNA percentage 98.96%
Ka/Ks Ratio 99.0 (Ka = 0.014, Ks = 0.0001)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 960 bp    Location:372255..383471   Strand:+
>bmy_15301
ATGATGAATGTAAGAAGACAAGAGGTTTCTTCTCCAAGAAAAGAAACTTCACCAAGGAGTCTTGGCATTCCTTTATTCCATGAAAGAGGTTATATAGAGAAGACTTTCCGGGATCTGAAAGAAGAATTTCATAGAATATGCATGCTAGCCAAAGCACAAAAAGACCACTTAAGCAAACTTAATGTACCAGCCACTGTAACTGAGACACAGTGCTCTGTGCCTATACAGTGTACGGATAAAACAGATAAACAAGAAGTGCTATTTAAGCCTCAGGCAAAAGATGATATAAATAGAGGTGCACCATGCATCACATCTGTCGCACCAAGAGGATTGGGCCAAGATGAGGAAGACACCTCTTTTGAATCACTTTCTAAATTCAATGTCAAGTTTCCACCTACGGACAGTGACTCTACTTTCTTACACAGCACTCCAGAAAGACCCAGTGTCCTTGGTCCTGCCTCATGTGAGGCTATGTGCCAGGATCAATTTAATTTGGAGCCCAGAGACAACCCGGGAAACTTTGTCAAAACAGAAGAAACTTTATTTGAAATTCAGGGAATTGACCCCATAGCTTCAGCTATACAAAACCTTAAAACAACTGACAAAACAAAACCCTCAAATCTTGTAAATTCTTGTATCAGGACAACTCTGGATAGAGCTCCGTGTTTGCCACCTGGAGACCATAATGCATTATATGTAAATACATTCCCACTTCAGGACCCATCTGATGCACCTTTTCCTTCACTCAATTCCCCAGGAAAAGCTATCCGAGGACCACAGCAGCCCGTTTGGAAGCCCTTTCCTAATCAAGACAGTGACTTATCGGTACTAAGTGGCACAGGCTCAGAACTGCATATACCTCGAGTATGTGAATTCTGTCAAGCAGTTTTCCCACCATCCATTACATCCAGGGGGGATTTCCTCCGGCATCTTAATTCACACTTTAATGGGGAGACTTAA

Related Sequences

bmy_15301T0 Protein

Length: 320 aa      View alignments
>bmy_15301T0
MMNVRRQEVSSPRKETSPRSLGIPLFHERGYIEKTFRDLKEEFHRICMLAKAQKDHLSKLNVPATVTETQCSVPIQCTDKTDKQEVLFKPQAKDDINRGAPCITSVAPRGLGQDEEDTSFESLSKFNVKFPPTDSDSTFLHSTPERPSVLGPASCEAMCQDQFNLEPRDNPGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNSCIRTTLDRAPCLPPGDHNALYVNTFPLQDPSDAPFPSLNSPGKAIRGPQQPVWKPFPNQDSDLSVLSGTGSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSHFNGET*