Part of scaffold_1115 (Scaffold)

For more information consult the page for scaffold_1115 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBR1 ENSTTRG00000006645 (Bottlenosed dolphin)

Gene Details

T-box, brain, 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006283, Bottlenosed dolphin)

Protein Percentage 90.99%
cDNA percentage 92.3%
Ka/Ks Ratio 0.44548 (Ka = 0.0692, Ks = 0.1554)

TBR1 ENSBTAG00000021692 (Cow)

Gene Details

T-box brain protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028908, Cow)

Protein Percentage 94.22%
cDNA percentage 93.81%
Ka/Ks Ratio 0.23777 (Ka = 0.0425, Ks = 0.1789)

TBR1  (Minke Whale)

Gene Details

T-box, brain, 1

External Links

Gene match (Identifier: BACU010076, Minke Whale)

Protein Percentage 91.92%
cDNA percentage 93.4%
Ka/Ks Ratio 0.6838 (Ka = 0.0647, Ks = 0.0946)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1974 bp    Location:530698..538322   Strand:+
>bmy_15303
ATGCAGCTGGAGCACTGCCTTTCTCCTTCTATCATGCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCTACCCACATTCAGGCGGATCTGAGCTCGTCTTGCACGATCATCCCATTATCTCGACCACTGACAACCTGGAGAGAAGTTCACCTTTGAAAAAAATTACCAGGGGGATGACGAATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTCTGCTGCAGATCGCTACCTCCTCTCTCAGTCCAGCCAGCCACAGTCCGCGGCCACTGCTCCCAGTGCCATGTTCCCGTACGCCGGCCAGCACGGACCCGCGCACCCCGCCTTCTCCATCGGCAGCCCCAGCCGCTACATGGCCCACCACCCGGTCATCACCAACGGAGCCTACAACAGCCTCCTGTCCAACTCCTCGCCGCAGGGCTACCCCACCGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCCCCGTTCTACCAGTTCTCCTCCACACAGCCCGGGCTGGTGCCCGGCAAAGCGCAGGTGTACCTGTGCAACAGGCCCCTTTGGCTGAAATTTCACCGGCACCAAACGGAGATGATCATCACCAAACAGGGCAGTTTTAACATTTCTGGTCTCGATCCCACGGCTCATTACAATATTTTTGTGGATGTGATTTTGGCGGATCCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAATGTGCAAGGCAAGAAATCGGGTCTATATGCATCCAGATTCCCCCAACACGGGGGCTCACTGGATGCGTCAAGAAATCTCTTTTGGAAAATTAAAACTTACAAACAACAAAGGAGCTTCAAACAACAATGGGCAGTGAACGAGGACGGCACGGAGGACACCAGCCAGCCCGGCCGCGTGCAGACATTCACTTTTCCCGAGACTCAGTTCATCGCCGTCACCGCCTACCAGAACACCGATATTACACAACTGAAAATAGATCACAACCCCTTTGCAAAAGGATTTCGGGATAATTATGACACGATCTACACTGGCTGCGACATGGACCGCCTGACCCCCTCGCCCAACGACTCCCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGGCCCCGGGCCGGGGACGGACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCCGGGCGCGCCGTCGCCGCAGCGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCCGCCTCGGCCTACGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGTTGCTCTCGTATGCGGCGGCGGGCGTGAAGGCGCTGCCGCTGCAGGCGGCCGGCTGCACTGGCCGCCCGCTCGGCTACTACGCCGACCCGTCGGGCTGGGGCGCGCGCAGCCCCCCGCAGTACTGCGGCGCCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCGCCGCGCGTATGGCCGGCGCCAACCCCTACCTGGGCGAGGAGGCCGAGGGCTTGGCCGCCGAGCGCTCGCCGCTGCCGCCCGGCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGACTCCAGCTGGATCGAGACGCCCTCCTCCATCAAGTCCATCGACTCGAGCGACTCGGGGATTTACGAGCAGGCCAAACGGAGGCGGATCTCGCCCGCTGACACGCCCGTGTCCGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCAAGGACATAGGCGGCTACTACGGCTTCTACTCGCACAGCTAG

Related Sequences

bmy_15303T0 Protein

Length: 658 aa      View alignments
>bmy_15303T0
MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTDNLERSSPLKKITRGMTNQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAADRYLLSQSSQPQSAATAPSAMFPYAGQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSLLSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFHRHQTEMIITKQGSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTNVQGKKSGLYASRFPQHGGSLDASRNLFWKIKTYKQQRSFKQQWAVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAGAGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATDFAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGAKSGSVLPCWPNSAAAAARMAGANPYLGEEAEGLAAERSPLPPGAEDAKPKDLSDSSWIETPSSIKSIDSSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLAQRDCEKNCAKDIGGYYGFYSHS*