Sequence detailsbmy_15303 (Coding sequence)

Part of scaffold_1115 (SequenceType object (1))

For more information consult the page for scaffold_1115 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBR1ENSTTRG00000006645 (Bottlenosed dolphin)

Gene Details

T-box, brain, 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006283, Bottlenosed dolphin)

Protein Percentage 90.99%
cDNA percentage 92.3%
Ka/Ks Ratio 0.44548 (Ka = 0.0692, Ks = 0.1554)

TBR1ENSBTAG00000021692 (Cow)

Gene Details

T-box brain protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028908, Cow)

Protein Percentage 94.22%
cDNA percentage 93.81%
Ka/Ks Ratio 0.23777 (Ka = 0.0425, Ks = 0.1789)

TBR1 (Minke Whale)

Gene Details

T-box, brain, 1

External Links

Gene match (Identifier: BACU010076, Minke Whale)

Protein Percentage 91.92%
cDNA percentage 93.4%
Ka/Ks Ratio 0.6838 (Ka = 0.0647, Ks = 0.0946)

Additional orthologs identified in other species via the OPTIC pipeline.

TBR1 (Human)   Tbr1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1974 bp    Location:530698..538322   Strand:+
Raw sequence 
>bmy_15303
ATGCAGCTGGAGCACTGCCTTTCTCCTTCTATCATGCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCTACCCACATTCAGGCGGATCTGAGCTCGTCTTGCACGATCATCCCATTATCTCGACCACTGACAACCTGGAGAGAAGTTCACCTTTGAAAAAAATTACCAGGGGGATGACGAATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTCTGCTGCAGATCGCTACCTCCTCTCTCAGTCCAGCCAGCCACAGTCCGCGGCCACTGCTCCCAGTGCCATGTTCCCGTACGCCGGCCAGCACGGACCCGCGCACCCCGCCTTCTCCATCGGCAGCCCCAGCCGCTACATGGCCCACCACCCGGTCATCACCAACGGAGCCTACAACAGCCTCCTGTCCAACTCCTCGCCGCAGGGCTACCCCACCGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCCCCGTTCTACCAGTTCTCCTCCACACAGCCCGGGCTGGTGCCCGGCAAAGCGCAGGTGTACCTGTGCAACAGGCCCCTTTGGCTGAAATTTCACCGGCACCAAACGGAGATGATCATCACCAAACAGGGCAGTTTTAACATTTCTGGTCTCGATCCCACGGCTCATTACAATATTTTTGTGGATGTGATTTTGGCGGATCCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAATGTGCAAGGCAAGAAATCGGGTCTATATGCATCCAGATTCCCCCAACACGGGGGCTCACTGGATGCGTCAAGAAATCTCTTTTGGAAAATTAAAACTTACAAACAACAAAGGAGCTTCAAACAACAATGGGCAGTGAACGAGGACGGCACGGAGGACACCAGCCAGCCCGGCCGCGTGCAGACATTCACTTTTCCCGAGACTCAGTTCATCGCCGTCACCGCCTACCAGAACACCGATATTACACAACTGAAAATAGATCACAACCCCTTTGCAAAAGGATTTCGGGATAATTATGACACGATCTACACTGGCTGCGACATGGACCGCCTGACCCCCTCGCCCAACGACTCCCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGGCCCCGGGCCGGGGACGGACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCCGGGCGCGCCGTCGCCGCAGCGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCCGCCTCGGCCTACGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGTTGCTCTCGTATGCGGCGGCGGGCGTGAAGGCGCTGCCGCTGCAGGCGGCCGGCTGCACTGGCCGCCCGCTCGGCTACTACGCCGACCCGTCGGGCTGGGGCGCGCGCAGCCCCCCGCAGTACTGCGGCGCCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCGCCGCGCGTATGGCCGGCGCCAACCCCTACCTGGGCGAGGAGGCCGAGGGCTTGGCCGCCGAGCGCTCGCCGCTGCCGCCCGGCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGACTCCAGCTGGATCGAGACGCCCTCCTCCATCAAGTCCATCGACTCGAGCGACTCGGGGATTTACGAGCAGGCCAAACGGAGGCGGATCTCGCCCGCTGACACGCCCGTGTCCGAGAGCTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCAAGGACATAGGCGGCTACTACGGCTTCTACTCGCACAGCTAG

Related Sequences

bmy_15303T0 SequenceType object (3)

Length: 658 aa      View alignments
>bmy_15303T0
MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTDNLERSSPLKKITRGMTNQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAADRYLLSQSSQPQSAATAPSAMFPYAGQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSLLSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFHRHQTEMIITKQGSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTNVQGKKSGLYASRFPQHGGSLDASRNLFWKIKTYKQQRSFKQQWAVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAGAGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATDFAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGAKSGSVLPCWPNSAAAAARMAGANPYLGEEAEGLAAERSPLPPGAEDAKPKDLSDSSWIETPSSIKSIDSSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLAQRDCEKNCAKDIGGYYGFYSHS*