Part of scaffold_1144 (SequenceType object (1))

For more information consult the page for scaffold_1144 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGCBENSTTRG00000002166 (Bottlenosed dolphin)

Gene Details

sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002032, Bottlenosed dolphin)

Protein Percentage 95.28%
cDNA percentage 95.6%
Ka/Ks Ratio 0.39075 (Ka = 0.0309, Ks = 0.079)

SGCBENSBTAG00000014601 (Cow)

Gene Details

Beta-sarcoglycan

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000052639, Cow)

Protein Percentage 91.48%
cDNA percentage 92.01%
Ka/Ks Ratio 0.28799 (Ka = 0.052, Ks = 0.1806)

SGCB (Minke Whale)

Gene Details

sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)

External Links

Gene match (Identifier: BACU008757, Minke Whale)

Protein Percentage 98.77%
cDNA percentage 98.57%
Ka/Ks Ratio 0.1734 (Ka = 0.0046, Ks = 0.0268)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 984 bp    Location:75596..44427   Strand:-
>bmy_15308
ATGCCGCCGTTCCTCCCGCTGCTGAAGCTCTTCCTCCTGCCGCTGGTGGTGCTGCTGGTGCCAAGTTCCAATGGTCCTGTAAAGAAGTCCATGCGTGAGAAGGCTGTTGAAAGAAGGAATGTCAATAAAGAGCACAATAGTAACTTTAAAGCCGGGTATATTCCAATTGATGAAGATCGCCTGCATAAAACGGGGCTGAGAGGGAGAAAGGGCAGCTTAGCCATCTGTGTGATTATCCTCCTGTTTATTCTGGCTGTCATCAATTTAATTGTAACACTTGTTATCTGGGCTGTGATTCGCATTGGACCAAATGGCTGTGACAGCATGGAGTTTCATGAAAGTGGTCTGCTTCGATTTAAGCAAGTATCTGACATGGGAGTTATACATCCTCTTTATAAGAGCACAGTAGGAGGAAGRCGAAATGAAAATTTAGTCATCACTGGCAACAACCAGCCTATTGTTTTTCAGCAAGGGACAACAAAGCTCAGTGTAGAGAAGAACAAAACTTCTATTATAAGTGACATTGGTGTGCAGTTTTTCGACCCAAGGACTCAAAATATCTTATTCAGCACAGACTATGAAACTCATGAGTTTCRTTTGCCAAGTGGAGTGAAAAGTTTGAATGTTCAAAAAGCATCTACTGAAAGGATTACCAGCAATGCTACTAGTGATTTAAATATAAAAGTTGATGGACGKGCTATTGTGCGTGGAAATGAAGGAGTATTCATTATGGGCAAAACCATTGAATTTCACATGGGTGGTAATATGGAGTTAAAGGCTGAAAACAGCATCATCCTGAATGGAACTGTGGTGGTCAGCACAACTCGCCTCCCTAGTTCCTCCAGCGGAGACCAGTTTGGGGGCGGTGACTGGGTACGCTACAAGCTCTGTATGTGCGCTGACGGAACCCTCTTCAAAGTACAGGTGACGGGCCAGAACATGGGCTGCCAGACCTCAGACAACCCCTGTGGAGACACTCATTAG

Related Sequences

bmy_15308T0 SequenceType object (3)

Length: 328 aa      View alignments
>bmy_15308T0
MPPFLPLLKLFLLPLVVLLVPSSNGPVKKSMREKAVERRNVNKEHNSNFKAGYIPIDEDRLHKTGLRGRKGSLAICVIILLFILAVINLIVTLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVEKNKTSIISDIGVQFFDPRTQNILFSTDYETHEFXLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNMELKAENSIILNGTVVVSTTRLPSSSSGDQFGGGDWVRYKLCMCADGTLFKVQVTGQNMGCQTSDNPCGDTH*