Sequence detailsbmy_15321 (Coding sequence)

Part of scaffold_1145 (SequenceType object (1))

For more information consult the page for scaffold_1145 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USH1GENSTTRG00000002612 (Bottlenosed dolphin)

Gene Details

Usher syndrome 1G (autosomal recessive)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002450, Bottlenosed dolphin)

Protein Percentage 98.04%
cDNA percentage 98.19%
Ka/Ks Ratio 0.08244 (Ka = 0.0083, Ks = 0.1006)

USH1GENSBTAG00000017252 (Cow)

Gene Details

Usher syndrome type-1G protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022930, Cow)

Protein Percentage 95.65%
cDNA percentage 95.36%
Ka/Ks Ratio 0.04916 (Ka = 0.0175, Ks = 0.3562)

Additional orthologs identified in other species via the OPTIC pipeline.

USH1G (Human)   Ush1g (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1380 bp    Location:83161..79535   Strand:-
Raw sequence 
>bmy_15321
ATGAACGACCAGTACCACCGGGCGGCTCGGGACGGCTACCTGGAACTCCTCAAGGAGGCCACCAGGAAGGAGCTGAACGCCCCCGACGAGGATGGCATGACCCCCACCCTCTGGGCTGCTTACCACGGCAACCTGGAGTCACTGCGCCTCATCGTGAGTCGAGGGGGTGACCCGGACAAGTGTGACATCTGGGGCAACACGCCCCTGCACCTGGCAGCTTCCAATGGCCACCTGCACTGCCTCTCCTTCCTGGTGTCCTTCGGGGCCAACATCTGGTGCCTGGATAACGACCTCCACACGCCGCTGGACATGGCGGCCATGAAGGGCCACCTGGAGTGCGTGCGCTACCTGGACTCCATCGCGGCCAAGCAGAGCAGCCTCAACCCCAAGCTGGTGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGCGGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCATGGAACGGCGCTACCGGCGCGAGCTGGCCGAGCGCTCGGACGCGCTCAGCTTCTCCAGCCTCACGTCCAGCACCCTGAGCCGCCGGCTGCAGCATCTGGCGCTCGGCAGCCACCTGCCCTACTCGCAGGCCACGCTGCACGGCACCGCCAAGGGCAAGACCAAGATCCAGAAGAAGCTGGAGCGGCGCAAGCAGGGCGGCGAAGGCACCTTCAAGATCTCCGAGGACGGCCGCAAGAGCGTGCGCTCGCTCTCGGGCCTGCAGCTGGGCAGTGACGTGATGTTTGTGCGCCAGGGCACCTACGCCAACCCCAAGGAGTGGGGCCGCGCCCCGCTCCGGGACATGTTCCTCTCCGACGAGGACAGCGTCTCCCGTGCCACACTGGCGGCCGAGCCTGCGCGCTCGGAGGTCAGCACCGACTCAGGCCACGACTCCCTGTTTACCCGCCCGGGCCTGGGCACCATGGTGTTCCGCAGGAACTACCTGAGCAGCGGGCTGCACGGCCTGGGCCGCGAGGACGCGGCCCTGGACGGCGCGGGCACGCCGCGGGGTCGGCTTCAGAGCTCCCCCAGCCTCGACGACGACAGCCTGGGCAGTGCCAACAGCCTGCAGGACCGCAGCTGCGGGGAGGAGCTGCCCTGGGACGAGCTGGACTTGGGCCTGGATGAGGACCTGGAGCCCGAGACGAGCCCGCTGGAGACGTTCCTGGCCTCCCTGCACATGGAGGACTTCACCTCCATCCTGCGGCAGGAGAAGATCGACCTCGAGGCGCTCATGCTGTGCTCGGACCTCGACCTCCGCAGCATTAGCGTCCCCCTGGGACCCCGCAAGAAGATCATGGGGGCCGTGCGGAGGCGAAGGCAGGCGCTGGAGCGCCCGCCGGCCCTGGAGGACACAGAC

Related Sequences

bmy_15321T0 SequenceType object (3)

Length: 460 aa      View alignments
>bmy_15321T0
MNDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDKCDIWGNTPLHLAASNGHLHCLSFLVSFGANIWCLDNDLHTPLDMAAMKGHLECVRYLDSIAAKQSSLNPKLVGKLKDKAFREAERRIRECAKMQRKHHERMERRYRRELAERSDALSFSSLTSSTLSRRLQHLALGSHLPYSQATLHGTAKGKTKIQKKLERRKQGGEGTFKISEDGRKSVRSLSGLQLGSDVMFVRQGTYANPKEWGRAPLRDMFLSDEDSVSRATLAAEPARSEVSTDSGHDSLFTRPGLGTMVFRRNYLSSGLHGLGREDAALDGAGTPRGRLQSSPSLDDDSLGSANSLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFTSILRQEKIDLEALMLCSDLDLRSISVPLGPRKKIMGAVRRRRQALERPPALEDTD