Part of scaffold_1145 (Scaffold)

For more information consult the page for scaffold_1145 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ICT1 ENSTTRG00000002617 (Bottlenosed dolphin)

Gene Details

immature colon carcinoma transcript 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002455, Bottlenosed dolphin)

Protein Percentage 71.36%
cDNA percentage 74.6%
Ka/Ks Ratio 0.58897 (Ka = 0.1537, Ks = 0.261)

ICT1 ENSBTAG00000003303 (Cow)

Gene Details

Peptidyl-tRNA hydrolase ICT1, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004276, Cow)

Protein Percentage 73.66%
cDNA percentage 79.02%
Ka/Ks Ratio 0.30805 (Ka = 0.1762, Ks = 0.572)

ICT1  (Minke Whale)

Gene Details

immature colon carcinoma transcript 1

External Links

Gene match (Identifier: BACU011504, Minke Whale)

Protein Percentage 74.27%
cDNA percentage 79.45%
Ka/Ks Ratio 0.45793 (Ka = 0.2005, Ks = 0.4378)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 630 bp    Location:148311..155946   Strand:+
>bmy_15325
ATGGCGGCCGTCCGGTGGCTGCGCTGGGGCCTGAACCGAGCCGAATCGTGGCTGCTCCCGCCGCCCGCGCGCTGCCCCCACCGAACTCTGAACAAACAGGTAGAGGGCACCGAATTCCAGAGCACCTACAGCCTGGACAAGCTCTACCCCAAATCGCGGGGCTCGGACATCGCCTGGAGGGTTCCGGTGAGCCGGGAGGGCCGGACGGAAGGGGCGTTTYCTGGACTCTGCTGGGCTCATTCCGTAGCCCGGTTTGCATCCCCGAGTTCATACAGGATAGAAACAGCCCCGGTGAATTCCAAGGCTGAAGTCAGGTTCCACCTGGCCAGCGCCGAGTGGATTGCAGAGTCTGTACGGCAGAAGATGGCGGTCACGCACAAAAATAAGATCAACAGGGCAGGAGAGTTGATCCTTACCTCTGAATGCAGCCGCTATCAGTTCCGAAATCTGGCAGATTGCCTACAGAAAATTCGAGACATGATTACTGAGGCCAGCCAGCCAGCCAAGGAGCCATCCAGAGAAGATGCTGTACTTCAGAAAATCAGGGTAGAAAACATGAATCGGGAAAGGCTGAGAAAAAAGAGAATAAATTCTGCCATAAAGACAAGCAGGAGGGTAGATGTGGACTGA

Related Sequences

bmy_15325T0 Protein

Length: 210 aa      View alignments
>bmy_15325T0
MAAVRWLRWGLNRAESWLLPPPARCPHRTLNKQVEGTEFQSTYSLDKLYPKSRGSDIAWRVPVSREGRTEGAFXGLCWAHSVARFASPSSYRIETAPVNSKAEVRFHLASAEWIAESVRQKMAVTHKNKINRAGELILTSECSRYQFRNLADCLQKIRDMITEASQPAKEPSREDAVLQKIRVENMNRERLRKKRINSAIKTSRRVDVD*