Sequence detailsbmy_15333 (Coding sequence)

Part of scaffold_1145 (SequenceType object (1))

For more information consult the page for scaffold_1145 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUP85ENSTTRG00000014395 (Bottlenosed dolphin)

Gene Details

nucleoporin 85kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013652, Bottlenosed dolphin)

Protein Percentage 95.91%
cDNA percentage 95.39%
Ka/Ks Ratio 0.26671 (Ka = 0.0282, Ks = 0.1058)

NUP85ENSBTAG00000016126 (Cow)

Gene Details

Nuclear pore complex protein Nup85

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000034574, Cow)

Protein Percentage 91.03%
cDNA percentage 89.34%
Ka/Ks Ratio 0.16584 (Ka = 0.0553, Ks = 0.3334)

NUP85 (Minke Whale)

Gene Details

nucleoporin 85kDa

External Links

Gene match (Identifier: BACU020206, Minke Whale)

Protein Percentage 95.71%
cDNA percentage 95.84%
Ka/Ks Ratio 0.37804 (Ka = 0.0303, Ks = 0.0802)

Genome Location

Sequence SequenceType object (2)

Length: 1770 bp    Location:302632..321831   Strand:+
Raw sequence 
>bmy_15333
ATGTCTTGTGTTTTGTTAGTTGCTGGTAAAGATCCAGCCGGTGGCCGCCAGTTTAGCATCCAGGTCTCCAGTCTGTCAGCAATGGAGCTCATTTGGAACCTTTGTGAGATTCTTTTTATTGAAGTAGCCCCAGCCGGCCCTCTTCTCCTTCACCTCCTTGACTGGGTCCAACTGCACGTGTGTGAGGTGGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACACGAGAGATTCTGGAACTTGGTGACCGTGTTGGTGCTGCAGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAAGGAGGCCGACACCAGCCCCACCTCTGCAGGCATGTGCCGAATCCTTGGGGACCTGATGAGGACAATGCCTGTTCTCAGCCCTGGTAACACTCAGACACTAACGGAGCTGGAGCTGAAGTGGCAGCACTGGCACGAGGAATGTGAGCGGCACCTCCAGGACGGCACGTTCGCCTCCAGTCCTCACCTCGAGTCTCTCTGCAAGGTCTGTGGGAAGCAAGTCCAGGCCAGGGTCTTCCCTGGCTTCCCCCGGGGGCTATGGCATCCAGTGCAGCAACGACAGGTCCTCCTGAGACAGGGCTGTTTATTGGCTCTGAGGGAAGGAGAGAGCTTTCAAACCAGATGCTCCAGTCGAGGTCAGGAGCATTATCGGGAAGTCACCCCCAGACCTCAGGGAAAGCGTCTCTCTTGTCAGATCATGCTGGGAGATGAAGCTGCCCTGTTGGAGCAGAGGGCGCTTCTGAGTAACTGGTACCATTTCCTAGTGACCCGGCTCCTATACTCTCACCCCACGGTCAAGCCCATGGATCTGCACTTCTACGCCCAGGTGAGTCTGAGCGCCTTGGGCATCGCCCTGAGCAACTGGTGGTTTGTGGCCCATCTGACAGACCTGCTGGATCACTGCAGACTCCTCCAGTCGCACAACCTCTACTTTGGATCCAACATGAGAGAGTTCCTCTTGCTGGAATATGCCTCAGGACTGTTTGCTCATCACAGCCTGTGGCAGCTGGGGGTGGATTACTTTGACTACTGCCCTGAGCTGGGCCGAGTCTCCTTGGAGCTGCACGTTGAGCGGATCCCTCTGAGCACGGAGCAGAAAGCCCTCAAGGTGCTGCGGGTTTGCGAGCAGCGGCAGATGACTGAGCAAGTTCGCAGCATTTGTAAGATCTTGGCCATGAAAGCCGTCCGCAACAATCGCCTGGGCTCCGCCCTCTCTTGGAGCATTCGAGCCAAAGATGCCGCCTTTGCCACGCTGGTCTCAGACAGGTTCCTCAGGGATTACTGTGAGCGAGGCTGCTTTTCTGATTTGGACCTCATTGACAACCTGGGGCCAGCCATGATGCTCAGTGACCGACTGACGTTCCTGGGAAAGTACCGCGAGTTCCACCGGTTATATGGGGAGAAGCGTTTTGTTGATGCTGCTTCTCTTCTCCTGTCATTGATGACGTCCCAGATTGCCCCCCGGTCTTTCTGGATGACACTACTAACAGATGCCTTGCCCCTTTTGGAACAGAAACAGGTACAGGTTGAGTCCACAGTGATTTTTTCAGCAGAGCAAACATACGAGCTGATGAGATGTCTGGAGGACTTGACCTCAGGAAGACCAGTGCGTGGAGAGCCTGATGCCCAGCAACTCCAGGATGATGATGTAGAGACCACCAAGGTGGAAATGCTGAGACTTGCTCTTGCACGAAATCTTGCTCGGTCAATTATAAAAGAAGGCTCATTGGAAGGTTCCTGA

Related Sequences

bmy_15333T0 SequenceType object (3)

Length: 590 aa      View alignments
>bmy_15333T0
MSCVLLVAGKDPAGGRQFSIQVSSLSAMELIWNLCEILFIEVAPAGPLLLHLLDWVQLHVCEVDSLSADVLGSENPSKHERFWNLVTVLVLQGRLDEARQMLSKEADTSPTSAGMCRILGDLMRTMPVLSPGNTQTLTELELKWQHWHEECERHLQDGTFASSPHLESLCKVCGKQVQARVFPGFPRGLWHPVQQRQVLLRQGCLLALREGESFQTRCSSRGQEHYREVTPRPQGKRLSCQIMLGDEAALLEQRALLSNWYHFLVTRLLYSHPTVKPMDLHFYAQVSLSALGIALSNWWFVAHLTDLLDHCRLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLGVDYFDYCPELGRVSLELHVERIPLSTEQKALKVLRVCEQRQMTEQVRSICKILAMKAVRNNRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGKYREFHRLYGEKRFVDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVQVESTVIFSAEQTYELMRCLEDLTSGRPVRGEPDAQQLQDDDVETTKVEMLRLALARNLARSIIKEGSLEGS*