Part of scaffold_1147 (Scaffold)

For more information consult the page for scaffold_1147 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NXT2 ENSTTRG00000005115 (Bottlenosed dolphin)

Gene Details

nuclear transport factor 2-like export factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004803, Bottlenosed dolphin)

Protein Percentage 92.25%
cDNA percentage 95.54%
Ka/Ks Ratio 0.96911 (Ka = 0.045, Ks = 0.0464)

NXT2 ENSBTAG00000020739 (Cow)

Gene Details

NTF2-related export protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027635, Cow)

Protein Percentage 91.55%
cDNA percentage 93.66%
Ka/Ks Ratio 0.27182 (Ka = 0.04, Ks = 0.1472)

NXT2  (Minke Whale)

Gene Details

nuclear transport factor 2-like export factor 2

External Links

Gene match (Identifier: BACU017183, Minke Whale)

Protein Percentage 90.14%
cDNA percentage 91.78%
Ka/Ks Ratio 99.0 (Ka = 0.016, Ks = 0.0002)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 429 bp    Location:250245..244076   Strand:-
>bmy_15361
ATGGCCATGCCCATGGATTTTAAAACTTAYGTAGATCAGGCATGCAAAGCTGCTGAGGAATTTGTCAATATTTACTATGAGACAATGGACAAAAGAAGACGGGCACTAACCAGGCTGTATCTGGACAAGGCCACTTTAATATGGAATGGAAATGTTGTAACAGGGCTGGAAGCCCTAACTAATTTTTTTGACACGTTGCCTTCTAGTGAGTTTCAGGTCAACATGCTAGATTGCCAGCCAGTTCATGAGCAAGCTACTCAGGCCCAGACTACAGTTCTCGTGGTGACCAGTGGAACTGTGAAGTTTGATGGAAACAGACAACACTACTTCAACCAGAACTTCCTGCTGACCGCTCAGTCTACTCCTAACAATACCGTGTGGAAGATTGCAAGCGACTGCTTCCGTTTTCAAGATTGGGCTAGTAGTTAA

Related Sequences

bmy_15361T0 Protein

Length: 143 aa      View alignments
>bmy_15361T0
MAMPMDFKTYVDQACKAAEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNVVTGLEALTNFFDTLPSSEFQVNMLDCQPVHEQATQAQTTVLVVTSGTVKFDGNRQHYFNQNFLLTAQSTPNNTVWKIASDCFRFQDWASS*