Sequence detailsbmy_15369 (Coding sequence)

Part of scaffold_1136 (SequenceType object (1))

For more information consult the page for scaffold_1136 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIP4ENSTTRG00000009674 (Bottlenosed dolphin)

Gene Details

thyroid hormone receptor interactor 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009200, Bottlenosed dolphin)

Protein Percentage 69.36%
cDNA percentage 74.01%
Ka/Ks Ratio 0.54631 (Ka = 0.1654, Ks = 0.3028)

BT.58152ENSBTAG00000014493 (Cow)

Gene Details

activating signal cointegrator 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019269, Cow)

Protein Percentage 70.99%
cDNA percentage 75.91%
Ka/Ks Ratio 0.51573 (Ka = 0.2529, Ks = 0.4904)

TRIP4 (Minke Whale)

Gene Details

thyroid hormone receptor interactor 4

External Links

Gene match (Identifier: BACU001054, Minke Whale)

Protein Percentage 96.88%
cDNA percentage 97.64%
Ka/Ks Ratio 0.79909 (Ka = 0.0229, Ks = 0.0287)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIP4 (Human)   Trip4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1683 bp    Location:117025..144905   Strand:+
Raw sequence 
>bmy_15369
ATGGCGGTGACTGGGGCGGTGTCCCGGGAGCAGCTGGTGGGCTGGTGCACCCAGAAGTTGCGGAAGACTTTCGGCCTGGAAGTCAGTGAGGAGATCATACAGTATGTTTTGTCAATTGAGAGTGCTGAAGAGCTACGAGAATATGTTACTGACCTTCTTCAGGGAAATGAGGGCAGAAAAGGTCAATTCATAGAAGAGCTTGTAACTAAATGGCAAAAGAATGATCAGGAGCTGATTTCTGATGCTCTGCAGCAGTCCTTCAAAAAAGATGAAATTTTAGATGGGCAGAGGTCAGGAGACCAGCTAAAGAGGAGTAGGCGGAAAGGGAGAAACAGACAGGAAGTTCCTGCATTTACTGAACCTGATACAACCATAGAGGTCAAAACACCTTTTGATTTGGCCAAGGCACAAGAGAACAGCAGCTCCTTGAAGAAGAAGACGAAGTTTGTCAGTTTATATACAAAAGAGGGACAGGACAAGCTTGCAGTCCTGATCCCTGGTCGCCACACTTGTGATTGCCTGGGCCAGAAGCACAAGCTGATCAATAACTGTCTGATCTGTGGGCGTATCGTCTGTGAGCAAGAGGGTTCTGGCCCCTGCTTGTTCTGTGGTACTCTGTTGATTTACATTGTTGTGCCACCAGTATGTACTCGTGAAGAACAGGATATTTTACAGCGTGACTCAAACAAGAGCCAGAAACTGCTGAAGAAGCTCATGTCAGGGACAGAGAATTCTGGAAAAGTGGACATCTCTACCAAGGACCTTCTTCCTCATCAAGAATTGCGATTTAAATCTGGTCTGGAGAAGGCTATCAAGCATAAAGAGAAACTGTTAGAGTTTGACAGAACTAGCATTCGAAGGACCCAAGTCATTGATGATGAGTCAGATTACTTTGCCAGTGATTCTAACCAGTGGTTGTCCAGAATTGAACGGGAAGCCCTACAGAAGCGAGAGGAGGAGCTGAGAGAATTTCGACATGCCTCTCGGCTCTCGAAGAAGATCACCATTGACTTTGCAGGCAGGAAGATCATGGAAGATGAAAATCCTCTAGCTGAGTATCACAGCAAACTAGATGAGGCAATACATGCCATTGCCAATGGAACCTTGAACCAACCACCGACAAAATTGGATAGATCTTCTGAAGAGCCTTTAGGACTTCTGGTGAATCCCAACCTGTACCAGTCCCCTCCGCAGGATAGAGGGACTGGTGGAGGAAGCACCTATGTCCCCAAATCAGTCAGCTGGGCTTATGAAACAGATGACCTAGAAGGAGATGTTTCAAACACTTGGCATAGTAATGATGATGACGTGTATAGGGCACCTCCAATTGACCATTCCATTCTGCCCACTGCTTCACGGGCTGCTTGGGAACCCAATATCGACCAGAGCCGTCTTCCCAAATCACCACCCTACACTGCTTTTCTAGGGAACCTGCCCTATGATGTGACAGAAGACTCCATTAAGAAATTCTTTAGAGGATTAAATATCAGTGCAGTGTGTTTACCACATGAACCCAGCAATCCTGAGAGGTTGAAAGGTTTTGGTTATGCTGAGTTTGAGGACCTGGATTCCTTGCTCAGTGCCCTGAGCCTCAATGAAGAGTCTCTAGGTAACAGGAGAATTCGAGTGGACGTTGCTGATCAAGCACAGGATAAAGACAGGGATGATCGTTCTTTTGGCTGA

Related Sequences

bmy_15369T0 SequenceType object (3)

Length: 561 aa      View alignments
>bmy_15369T0
MAVTGAVSREQLVGWCTQKLRKTFGLEVSEEIIQYVLSIESAEELREYVTDLLQGNEGRKGQFIEELVTKWQKNDQELISDALQQSFKKDEILDGQRSGDQLKRSRRKGRNRQEVPAFTEPDTTIEVKTPFDLAKAQENSSSLKKKTKFVSLYTKEGQDKLAVLIPGRHTCDCLGQKHKLINNCLICGRIVCEQEGSGPCLFCGTLLIYIVVPPVCTREEQDILQRDSNKSQKLLKKLMSGTENSGKVDISTKDLLPHQELRFKSGLEKAIKHKEKLLEFDRTSIRRTQVIDDESDYFASDSNQWLSRIEREALQKREEELREFRHASRLSKKITIDFAGRKIMEDENPLAEYHSKLDEAIHAIANGTLNQPPTKLDRSSEEPLGLLVNPNLYQSPPQDRGTGGGSTYVPKSVSWAYETDDLEGDVSNTWHSNDDDVYRAPPIDHSILPTASRAAWEPNIDQSRLPKSPPYTAFLGNLPYDVTEDSIKKFFRGLNISAVCLPHEPSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNRRIRVDVADQAQDKDRDDRSFG*