Part of scaffold_1157 (Scaffold)

For more information consult the page for scaffold_1157 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFSF11 ENSTTRG00000010108 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor (ligand) superfamily, member 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009586, Bottlenosed dolphin)

Protein Percentage 66.8%
cDNA percentage 72.14%
Ka/Ks Ratio 0.5284 (Ka = 0.3029, Ks = 0.5732)

TNFSF11 ENSBTAG00000008924 (Cow)

Gene Details

tumor necrosis factor ligand superfamily member 11

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011745, Cow)

Protein Percentage 65.23%
cDNA percentage 70.44%
Ka/Ks Ratio 0.39509 (Ka = 0.2987, Ks = 0.756)

TNFSF11  (Minke Whale)

Gene Details

tumor necrosis factor (ligand) superfamily, member 11

External Links

Gene match (Identifier: BACU012165, Minke Whale)

Protein Percentage 63.37%
cDNA percentage 71.19%
Ka/Ks Ratio 0.6913 (Ka = 0.3459, Ks = 0.5004)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 771 bp    Location:614228..624751   Strand:+
>bmy_15442
ATGTCCAGGGCCCTCATGGCTTACTTTGGAGGCTTCACCAGCCAAGCTCTGAACAAGTCTTGGCAGGTTCTGAGCCTGCTGTTTTCTGAAGCCCCTCCCCCCCCCAAGAATTCTGAGACCATATTTCCTGATGTTGAGGTTCCTTTTTGTCAGATCCCTGGTCAAGGGAAGACTAAACCAGGAAATTCCAGAAATCAGGGTACCATTGGGAATCCAAAGATCATGAGAAAAGACTTGGGAGATTGGCAGTCAGCAGGGGAGAGAAATAAATCTTGGATGGAGTGGGGAGAGGAACAAAGCCTGGAAATGCAACATGTTGTCAAATCACAACACATCAGAGCAGAAAAAGGTTCCCATAAAGTGAGTCTGTCCTGCTGGTACCATGACCGAGGTTGGGCCAAGATCTCCAACATGACTTTCAGCAATGGAAAGCTAATAGTTAACCAAGATGGCTTTTATTACCTGTATGCCAACATTTGCTTTCGACATCATGAAACTTCGGGAAACCTCACTGCGAATTATCTTCAGCTAATGGTGTATGTCACCAAGACCAGCATCAAAATCCCGAGTTCTCATACCCTCATGAAAGGAGGAAGCACCAAATACTGGTCGGGGAATTCTGAATTCCATTTTTACTCCATAAACGTTGGAGGATTTTTTAAGCTACGGTCTGGTGAGAAAATAAGCATTGAGGTATCCAACCCTTCACTACTGGATCCAGATCAAGATGCAACGTACTTTGGGGCTTTTAAAGTTCGAGATATAGATTGA

Related Sequences

bmy_15442T0 Protein

Length: 257 aa      View alignments
>bmy_15442T0
MSRALMAYFGGFTSQALNKSWQVLSLLFSEAPPPPKNSETIFPDVEVPFCQIPGQGKTKPGNSRNQGTIGNPKIMRKDLGDWQSAGERNKSWMEWGEEQSLEMQHVVKSQHIRAEKGSHKVSLSCWYHDRGWAKISNMTFSNGKLIVNQDGFYYLYANICFRHHETSGNLTANYLQLMVYVTKTSIKIPSSHTLMKGGSTKYWSGNSEFHFYSINVGGFFKLRSGEKISIEVSNPSLLDPDQDATYFGAFKVRDID*