Part of scaffold_1178 (Scaffold)

For more information consult the page for scaffold_1178 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GIN1 ENSTTRG00000001058 (Bottlenosed dolphin)

Gene Details

gypsy retrotransposon integrase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000995, Bottlenosed dolphin)

Protein Percentage 99.04%
cDNA percentage 98.98%
Ka/Ks Ratio 0.11313 (Ka = 0.0041, Ks = 0.0359)

GIN1 ENSBTAG00000021471 (Cow)

Gene Details

Gypsy retrotransposon integrase-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050552, Cow)

Protein Percentage 91.98%
cDNA percentage 93.32%
Ka/Ks Ratio 0.1883 (Ka = 0.037, Ks = 0.1967)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1572 bp    Location:581274..611235   Strand:+
>bmy_15458
ATGATGGTTCGTAGTGGAAAAAATGGTGACCTTCATCTTAAACAGATTGCATATTATAAACGAATTGGTGAATATCATCCAACTACACTGCCTAGTGAGAGAAGTGGCATAAGAAGAGCAGCAAAAAAATTTGCCTTCAAAGAAAAAAAGCTGTTTTATGTCGGAAAAGACAGAAAACAAAATCGTTTGGTAATTGTTTCAGAAGAAGAAAAAAAGAAAGTCCTGAGAGAATGCCATGAAAATGACACTGGAGCCCATCATGGCATATCCAGAACCCTTACTCTAGTGGAATCCAGCTACTATTGGACTTCTGTGACCAATGATGTCAAACAGTGGGTATATGCTTGTCAGCATTGCCAAGTGGCAAAAAATACGGTTATTCTAGCACCTAAACAGCACCTTCTCAAAGTGGAGAATCCATGGAGTATAGTTACTGTTGATCTGATGGGCCCATTTCATACAAGCAGCAGAAGTCATGTATATGCTATAATCATGACAGATTTGTTCACAAAATGGGTTGTGATTTTGCCTCTTTGTGATGTTTCAGCATCAGAAATTTCTAAAGCTATTATCAATATATTTTTCTTATATGGACCTCCTCAGAAAATAATAATGGACCAAAGAGATGAGTTCATTCATCAGATCAATGTAGAACTGTGTGAATTGTTTGGTACAAAGCAAATTGTAATTTCTCATGCCTCCCAAACTATTAATCCAACTGTAAGTACACCTAGCACAATCAAAACATTTCTTTCCAAACACTGTGCTGACTACCCAAACAACTGGGATGATCACCTAGCAGCTGTTTCATTTGCCTTCAATGTTACTCACTTGGAATCTACTAAAAATACACCATATTTTCAAATGTTTAATCGAAATCTTTACATGCCTGAGACTTCAGATATTCTTCGTGAAGTGGATGGTAATAATACAAGTATGTTTGCCAGAATTCTAGGTGCAATTAAAGAAGCTGATAAAATAATGGAGAATAAGACAACTTCAGCGGGCCAGATGGAGAACAACAGTTTTGATGAACTAAATAAAAGCAAAATCATTGTTAAAAAGAAACCAAAGCAATTAAATCCATTTCATCTAAAAGTGGGTCATGAAGTTTTAAGACAAAGGAAAAACTGGTGGAAGGATGGTCGTTTCCAATCTGAATGGGTTGGTCCTTGTGTCATAGACTATATTACAGAAAATGGATGTGCTGTTCTGAGAGACAACACTGGGACTAGACTTAAAAGACCCATCAAAATGTCCCACCTCAAGCCCTATGTAAGAGAATCCAGTGAACAAGACAGTCTTTATCTCTTACAAGGTTCAGTAGTGGCAGATCATGACTACATTGGAATGCCTGAAATTTCAGTTGGAGCATACCAAGCAAATATTCTGGTAGAAGATGCAACTATTGGAGTAGTCGACAATGAATTACTGACATCAAGCAAGGATCGTGAACTGTTAGAATATAGAAATGCCAAAATTTCTCCCTTGATAGACGATCATAGTACTCTTGAAAAGCAGACTTTTAGTCTCTTGGACTCTTCAAACCAAGTCCTTGAGTACTTAAGTTAG

Related Sequences

bmy_15458T0 Protein

Length: 524 aa      View alignments
>bmy_15458T0
MMVRSGKNGDLHLKQIAYYKRIGEYHPTTLPSERSGIRRAAKKFAFKEKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDTGAHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKNTVILAPKQHLLKVENPWSIVTVDLMGPFHTSSRSHVYAIIMTDLFTKWVVILPLCDVSASEISKAIINIFFLYGPPQKIIMDQRDEFIHQINVELCELFGTKQIVISHASQTINPTVSTPSTIKTFLSKHCADYPNNWDDHLAAVSFAFNVTHLESTKNTPYFQMFNRNLYMPETSDILREVDGNNTSMFARILGAIKEADKIMENKTTSAGQMENNSFDELNKSKIIVKKKPKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITENGCAVLRDNTGTRLKRPIKMSHLKPYVRESSEQDSLYLLQGSVVADHDYIGMPEISVGAYQANILVEDATIGVVDNELLTSSKDRELLEYRNAKISPLIDDHSTLEKQTFSLLDSSNQVLEYLS*