Part of scaffold_1160 (Scaffold)

For more information consult the page for scaffold_1160 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TJP1 ENSTTRG00000014712 (Bottlenosed dolphin)

Gene Details

tight junction protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013951, Bottlenosed dolphin)

Protein Percentage 95.32%
cDNA percentage 95.3%
Ka/Ks Ratio 0.2863 (Ka = 0.0157, Ks = 0.0548)

BT.29712 ENSBTAG00000015398 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038633, Cow)

Protein Percentage 84.94%
cDNA percentage 83.15%
Ka/Ks Ratio 0.18891 (Ka = 0.1005, Ks = 0.5319)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5256 bp    Location:521772..635986   Strand:+
>bmy_15464
ATGTCCGCCAGGGCCGCGGCCGCCAAGAACACAGCAATGGAGGAAACAGCTATATGGGAACAACACACGGTGACACTTCACAGGGCTCCTGGATTTGGATTTGGAATTGCAATATCTGGTGGAAGAGATAATCCTCATTTCCAGAGTGGGGAAACCTCGATAGTGATTTCAGATGTGCTTAAAGGAGGACCCGCAGAAGGGCAGCTGCAGGAAAATGACCGAGTCGCGATGGTTAATGGCGTTTCAATGGATAATGTTGAACATGCTTTTGCYGTTCAGCAACTAAGGAAAAGTGGAAAAAATGCAAAAATTACCATTCGAAGGAAAAAGAAAGTTCAGATACCAGTAAGTCGTCCTGATCCTGAACCAGTATCTGAGAATGAAGAAGATAGTTATGATGAGGAAGTACACGACCGGAGAAGTGGCCGTGGGGGCCTGGTTAACAGGAGGAGTGAGAAGAGCTGGGCCAGGGATAGAAGTGCAAGTCGAGAGAGGAGTCTGTCTCCGCGATCTGATAGGCGATCTGTGGCCTCCAGTCAACCTGCCAGACCCACCAAAGTCACACTGGTGAAATCCCGGAAAAACGAAGAATATGGTCTTCGATTGGCCAGCCACATATTTGTAAAGGAAATTTCACAAGATAGTTTGGCAGCAAGAGATGGCAATATTCAAGAAGGCGATGTTGTATTGAAGATAAATGGTACCGTGACGGAAAATATGTCATTGACAGATGCAAAGACATTGATAGAGAGGTCTAAAGGCAAGTTAAAGATGGTAGTTCAGAGAGATGAACGGGCTACCCTGCTGAACGTCCCTGATCTTTCTGACAGTATACACTCGGCTAATGCCTCCGAGAGAGATGACATTTCAGAAATTCAGTCACTGGCATCAGATCATTCCGGTCGATCACACGACCGGCCTCCCCGTCACAGCCGATCACGATCTCCTGACCAGCGGTCAGAGCCTTCTGACCATTCTAGACAGTCTCCACAGCAGCCCAGCAATGGCAGACATGCTGTGGAGTCCTTCATCCTTTTTTCCCCCCCTTCACCTCTGAAAGATAGTCAGCATGCAGATGATCACACACCTAAAACAGTGGAAGAAGTTATAGTTGAAAGAAACGAGAAACAAACACCCAATCTTCCAGAACCAAAGCCTGTGTATGCTCAGGTTGGACAGCCAGACGTGGATTTACCTGTCAGTCCGTCTGATGGGATCCTGCCTAATGCAACTCATGAAGATGGGATTCTTCGGCCCAGCATGAAATTAGTAAAATTCAGGAAAGGAGATAGTGTGGGTTTGCGGCTGGCTGGTGGAAATGATGTTGGAATATTTGTAGCTGGCGTTCTTGAAGATAGCCCTGCTGCCAAAGAAGGCTTGGAAGAGGGTGATCAGATTCTCAGGGTAAACAATGTAGACTTCACAAATATCATAAGAGAAGAAGCTGTCCTTTTTCTACTTGACCTCCCAAAAGGAGAAGAAGTGACCATATTGGCTCAGAAGAAGAAGGATGTTTATCGTCGCATCGTAGAATCAGATGTAGGAGATTCTTTCTATATTAGAACCCATTTTGAATATGAAAAGGAATCTCCCTATGGACTTAGTTTTAACAAAGGAGAGGTGTTYCGTGTTGTGGATACTTTGTACAATGGAAAACTGGGCTCTTGGCTTGCTATTCGAATTGGCAAAAATCATAAGGAGGTAGAACGAGGCATCATCCCTAATAAGAACAGAGCTGAGCAGTTAGCCAGTGTACAGTACACACTTCCAAAGACGGCAGGAGGAGACCGTGCCGACTTCTGGAGATTCCGAGGTCTGCGTAGCTCCAAGAGAAATCTGCGCAAGAGCAGAGAAGATTTGTCAGCTCAGCCGGTTCAGACAAAGTTCCCAGCATATGAGAGAGTTGTTCTTCGAGAAGCTGGATTTCTGAGGCCTGTAACCATCTTTGGACCAATAGCTGATGTTGCCAGAGAAAAGCTGGCCAGRGAAGAACCAGATATTTATCAGATTGCAAAAAGTGAACCTCGAGATGCTGGAACTGACCAACGGAGCTCTGGCATTATTCGCCTTCATACAATAAAGCAAATAATAGATCAAGATAAACATGCTTTATTGGATGTAACACCAAATGCAGTTGATCGTCTGAATTACGCCCAGTGGTATCCAATTGTAGTATTCCTTAACCCTGATTCTAAGCAAGGTGTGAAAACAATGAGGATGAGGTTATGTCCAGAATCTCGGAAAAGCGCCAGGAAATTATATGAGCGGTCTCATAAACTTCGTAAAAATAATCACCATCTTTTTACAACTACAATTAATTTAAATTCAATGAATGATGGWTGGTATGGTGCATTGAAAGAAGCAATTCAGCAACAACAGAACCAGTTGGTGTGGGTTTCTGAGGGAAAGGCGGATGGTGCTACAAGTGATGACCTTGATTTGCATGATGATCGTCTGTCCTACCTGTCAGCCCCAGGTAGTGAATACTCAATGTATAGCACGGACAGTAGACATACTTCTGACTATGAAGACACAGATACAGAAGGCGGGGCCTACACTGATCAAGAACTAGATGAGACTCTTAATGATGAGGTGGGGACTCCCCCGGAGTCTGCCATTACACGGTCCTCTGAGCCTGTCAGAGAGGACTCCTCTGGAATGCATCATGACCACCAGACATATTCTCCTTACTCACCACAAGCGCAGCCACAGCCAGTTCATAGAATAGACTCCCCTGGACTTAAAACAGCCTCTCAACAGAAAGCAGAAGCCTCATCTCCAGGCCCTTACCTTTCGCCTGAAACAAACCCAGCATCATCAACCTCTGCTGTTAATCCTAATGTAAACTTAACTAATGTCAGACTGGAGGAGCCCACCCCAGCTCCTTCCACCTCTGACTCACCACAAGCTGATTCTTTAAGAGCACCACGCACTGAGGCAGCTCACATAATGCTAAGAGGTCAAGAGCCATCATTGTCGTCGCATGTAGATCCAGCAAAGGTATATAGGAAGGATCCCTATCCTGAGGAAGTGATGAGACAGAACCATGTTTTGAAGCAGCCAGCTGTTGCTCACCCAGGGCAGAGGCTAGACAAGGAGCCCAGTCTGAGCTATGAGCCGCAGCCCCCATACGCAGAGAGACAAGCCAGCAGGGACCTGGAGCAGCCTGCCTACAGATACGACTCCTCAAACTACGCGGACCAGCTTCCTCGAAACTATGACCATCGTCTGCGCTATGACGACCGCATCCCTGCGTATGAGGAGCAGTGGTCCTATTATGATGACAAACAGCCGTACCAGCCCCGGCCTTCTTTTGATAATCAGCACCCGCGAGACCTGGACTCCAGACAGCATCCTGAGGAGTCCTCAGAACGAGGGTATTTCCCACGTTTTGAGGAGCCAACCCCTCTGTCCTGTGAAAGCCGACCGCGCTACGACCCGCCACTCAGGACCTCCACCCTGCGGCACGAAGAGCAGCCTGCTCCTGGGTTTGACATGCACGGGAGGTACAGGCCAGATGCGCAGCCCTACTCCTCCACAGGCCCCAAGGCGTCCGAGCCTAAGCAGTATTTTGACCAGTACCCACGGAGTTACGAGCAGGTSCCGCCCCAAGGCTTCACCTCCAAAGCAGGCCCGGGCCACTACGAGCCTCTCCACAGTGCTGCCCTTGTCCCGCCTCAGCACAAGCCGGAAGTGCCGCCAGCAAGTACCAAACCACTGCCTCCACCCCCAGCTCTGGCCGAGGAAGAGGAAGACCCAGCGATGAAGCCGCAGTCAGTGCTCACCAGAGTGAAAATGTTTGAAAACAAAAGGTCTGCATCAGTGGAGAACAAGAAGGACGAAAACCATAACTCTGGTTTCAAGCCTCCAGAGGTCACGTCTAAAGCTGCAGGTGCTCCCGTCCTGGGTCCTAAAGCCCCTGCTCAGAATCAGCTCATTGAACACGACAGAACACTGCACAGGATCCCCGAACCGCAAAAACCTCAAATGAAGCCGCCTGAAGACATTGTTAGGTCAAATCATTATGATCCTGAGGAAGATGAAGAATACTATCGAAAACAGCTCTCCTACTTTGATCGAAGAAGTTTTGAGAGCAAGCCTTCTGCACATGTCCCTGCCAGCCACCTCTCAGAGCCTGCCAAGCCGGTTCATTCTCAGAGTCAGCCACAGTTTTCTAGTTACTCTTCCAAGGGGAAGTCTGCTGAGGCTGAAGCTGTGGACAGGCCGTTTGGGGAGAAGCGCTATGACCCACTGCAGGCCACACCGCCCCCTCCGCCGCTGCCTGCCCAGTACAGCCAGGCCGCCCAGCCTGGCCCCAGCACCGCCCTCAGCCTCCACTCACACACCAAGGGGACACTCGGCGAAGACCCACCCCCATCTCAGAATAAGCCAGCAGCTTACAGACCAGCCAACCGAGAAGACGCTGCCCAGTCTGCTTTCTATCCCCAGAAGAGTTTCCCAGATAAAGCCCCAGCTAACGGGGCCGAACAGACTCAGAAAACGATCACTCCAGCATACAATCGATTCACACCAAAACCATATACAAGTTCTGCGCGGCCATTTGAACGCAAGTTTGAAAGTCCTAAATTCAGTCACAATCTCCTGACGAGTGAAACTGCACATAAACCTGACTTGTCTTCCAAAGCCCCCACTTCTCCGAAAACTCTGGTGAAAGCACACRGTTCCACGCAGCCTCCAGAGTTTGACAGTGGAGTTGAGACGTTCTCTGTCCACACAGATAATAAGCCTAAATATCAAGTAAACAGTATCAGCACAGGGCCTAAAGCTGTGCCCGTGAGTCCCTCAGCTGTAGAAGAGGATGAAGACGAGGACGGTCACACTGTGGTGGCCACCGCCCGTGGCGTATTTAACAACAACGGCGGGGTGCTGAGCTCCATAGAGACCGGCGTTAGTATAATTATCCCACAAGGAGCCATTCCTGAGGGAGTCGAGCAGGAAATCTATTTCAAGGTCTGCCGAGACAACAGCATCCTCCCGCCTTTGGATAAGGAGAAAGGTGAGACCCTGCTGAGCCCCTTAGTGATGTGCGGGCCCCATGGCCTCAAGTTCCTGAAGCCCGTGGAGCTGCGCTTACCACACTGTGCGTCCATGACTCCTGACGGTTGGTCTTTTGCTCTAAAATCATCCGACTCCTCGTCGGGCGATCCTAAAACCTGGCAAAACAAGTGTCTTCCTGGAGATCCAAATTATCTTGTTGGAGCAAACTGTGTTTCTGTCCTGATTGACCACTTTTAA

Related Sequences

bmy_15464T0 Protein

Length: 1752 aa      View alignments
>bmy_15464T0
MSARAAAAKNTAMEETAIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKKVQIPVSRPDPEPVSENEEDSYDEEVHDRRSGRGGLVNRRSEKSWARDRSASRERSLSPRSDRRSVASSQPARPTKVTLVKSRKNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDERATLLNVPDLSDSIHSANASERDDISEIQSLASDHSGRSHDRPPRHSRSRSPDQRSEPSDHSRQSPQQPSNGRHAVESFILFSPPSPLKDSQHADDHTPKTVEEVIVERNEKQTPNLPEPKPVYAQVGQPDVDLPVSPSDGILPNATHEDGILRPSMKLVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAYERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGIIRLHTIKQIIDQDKHALLDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQNQLVWVSEGKADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETLNDEVGTPPESAITRSSEPVREDSSGMHHDHQTYSPYSPQAQPQPVHRIDSPGLKTASQQKAEASSPGPYLSPETNPASSTSAVNPNVNLTNVRLEEPTPAPSTSDSPQADSLRAPRTEAAHIMLRGQEPSLSSHVDPAKVYRKDPYPEEVMRQNHVLKQPAVAHPGQRLDKEPSLSYEPQPPYAERQASRDLEQPAYRYDSSNYADQLPRNYDHRLRYDDRIPAYEEQWSYYDDKQPYQPRPSFDNQHPRDLDSRQHPEESSERGYFPRFEEPTPLSCESRPRYDPPLRTSTLRHEEQPAPGFDMHGRYRPDAQPYSSTGPKASEPKQYFDQYPRSYEQVPPQGFTSKAGPGHYEPLHSAALVPPQHKPEVPPASTKPLPPPPALAEEEEDPAMKPQSVLTRVKMFENKRSASVENKKDENHNSGFKPPEVTSKAAGAPVLGPKAPAQNQLIEHDRTLHRIPEPQKPQMKPPEDIVRSNHYDPEEDEEYYRKQLSYFDRRSFESKPSAHVPASHLSEPAKPVHSQSQPQFSSYSSKGKSAEAEAVDRPFGEKRYDPLQATPPPPPLPAQYSQAAQPGPSTALSLHSHTKGTLGEDPPPSQNKPAAYRPANREDAAQSAFYPQKSFPDKAPANGAEQTQKTITPAYNRFTPKPYTSSARPFERKFESPKFSHNLLTSETAHKPDLSSKAPTSPKTLVKAHXSTQPPEFDSGVETFSVHTDNKPKYQVNSISTGPKAVPVSPSAVEEDEDEDGHTVVATARGVFNNNGGVLSSIETGVSIIIPQGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKTWQNKCLPGDPNYLVGANCVSVLIDHF*