Sequence detailsbmy_15497 (Coding sequence)

Part of scaffold_1185 (SequenceType object (1))

For more information consult the page for scaffold_1185 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EPHA1ENSTTRG00000010811 (Bottlenosed dolphin)

Gene Details

EPH receptor A1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010250, Bottlenosed dolphin)

Protein Percentage 94.2%
cDNA percentage 95.4%
Ka/Ks Ratio 0.26416 (Ka = 0.0204, Ks = 0.0771)

EPHA1ENSBTAG00000006359 (Cow)

Gene Details

ephrin type-A receptor 1 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008354, Cow)

Protein Percentage 91.68%
cDNA percentage 91.4%
Ka/Ks Ratio 0.1358 (Ka = 0.0414, Ks = 0.3046)

EPHA1 (Minke Whale)

Gene Details

EPH receptor A1

External Links

Gene match (Identifier: BACU010939, Minke Whale)

Protein Percentage 98.53%
cDNA percentage 98.91%
Ka/Ks Ratio 0.26027 (Ka = 0.0067, Ks = 0.0259)

Additional orthologs identified in other species via the OPTIC pipeline.

EPHA1 (Human)   Epha1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2856 bp    Location:454358..468931   Strand:+
Raw sequence 
>bmy_15497
ATGGATACTAGCAAGGCACAGGGAGAGCTGGGCTGGCTGCTGGATCCCCCAGAGGATGGGTGGAGTGAGGTGCAGCAGATACTGAACGGGACACCACTGTACATGTACCAGGACTGCCCAGTGCAAGAAAGCAGAGACACTGACCACTGGCTTCGCTCCAATTGGATCTACCGGGGAGAGGAGGCCTCGCGTGTCCACGTGGAGCTGCAGTTCACCGTGCGGGACTGCAAGAGTTTCCCCGGGGAAGCTGGGCCTCTGGGCTGCAAAGAGACCTTCAACCTCCTGTACATGGAGAGTGACCAGGATGTGGGCGTTCAGCTCCGGCGGCCCCTGTTCCAGAAGGTAACCACAGTGGCTGCAGACCAGAGCTTCACCATTCGAGACCTTGCGTCTGGAGCCGTGAAACTGAACGTGGAGCGCTGCTCCTTGGGCCACCTGACCCGCCGAGGCCTCTATCTCGCTTTCCACAACCCGGGTGCCTGTGTGGCCCTGGTATCTGTCCGGGTCTTCTACCAGCGCTGCCCTGAGACTGTGCACGGCTTGGCCCAATTCCCCGACACTCTCCCCGGACCAGGCGGGTTGGCCGAAGTGGCAGGGACCTGCTTGCCCCACGCCCACGTCACCCCTGGCCCCTCGGGTGCACCCCGCATGCACTGCAGCCCCGACGGCCAGTGGTTGGTGCCAGTGGGGCGGTGCCACTGTGAGCCTGGTTACGAGGAAGGCGGCGGCGGCGGTGTCGAGGGATGCCTTGCCTGCCCGAAAGGCTTCTACAGAGCTGACGTGAACACACCCAGTTGTCTCAAGTGCCCCCAACACAGCACAGCCGAGTCTGAAGGGGCCACCATGTGCACCTGCGAGAGCGGGCACTACCGCGTTCCTGGGGAGGGCCCCGCCGCAGCGTGCACGCGTCCCCCCTCCGTCCCCCGAAACCTGAGCTTCTCTGTTTCGGGGACTCAGCTCTCCCTGCGCTGGGAGCCCCCAGTAGACCTGGGAGGACGCGAGGATGTCAGATACGACGTGGGGTGTTCTCAGTGTCGGGGAGCAGCGCTGGACGGGGAGCCCTGCCAGCCCTGCGGGGGAAGCGTGCGCTTCTCCCCGGGGCCCAGCGGGCTCACTTCGGCCGCTGTGTGCGTGGATGGCCTTGATCCCGACGCCAACTACACCTTTAACGTTGAAGCCCAGAACGGAGTGTCGGAGCTGGGCGCCTCCAAGCCCGCCAGCGCCTCCCTCAGCATCAGCATGGGGCGTGCAGAGACCCCGTCAGGCTTGTCCCTGAGGCTGGTGAAGAAGGCGCCGCGGCAGCTGGAGCTGACCTGGGCGGGGTCCCGGCCTCGCAGCCCCGGGGGGAACCTCAGCTACGAGCTGCACGTGCTGAACCAGGATGAAGAACGGTACCAGCTGGTTCTAGAGCCCCGGGTCCTGCTGACCGAACTGCAGCCAGACACCACGTACACCGTCAGAGTCCGGATGGTGACCCCTCTGGGCCCCGGCCCCTTCTCCCCTGACCATGAGTTTCGGACCAGCCCACCAGTTTCCAGGGTCGTGACTGGAGGAGAGATCGTGGCCATCATCTGTGGGCTGCTGCTGGGTGTGGCTCTGCTTCTCGGAATGCTTGTCTTCCGTTCCAGGAAAGCTCAGCGGCGACGGCACCAGAGGCGGCAGAGGCAGCGTGATCGTGTCGCTGATGGGGACAGAGAGGACAAGCTGTGGCTGAAGCCTTACGTGGACCTCCAGGCATATGAGGACCCTGCCCAGGGAGCCCTGGACTTCACCCAGGAGCTCGATCCAGCCTGGCTGGTTGTGGACACCGTCATAGGGGAAGGAGAGTTTGGGGAAGTATATCGAGGGTCCCTGAGGATCACCGGCCAGGATGCCAAGACTGTGGCCATAAAGACCTTGAAAGACACATCTCCCGATGGCCAGTGGTGGAACTTCCTTCGAGAGGCAACTATCATGGGCCAGTTCAGCCACCCGCACGTTCTGCACCTGGAAGGCGTTGTCACAAAGAGAAAGCCCATCATGATCATCACGGAGTTTATGGAGAATGGAGCCCTGGATGCCTTCCTGAGGGAGCGGGAGGACCAGCTGGTCCCTGGGCAGCTGGTGGCCATGCTGCAGGGCATAGCATCTGGCATGAACTACCTCAGTGACCACAGTTACGTCCACCGGGACCTGGCCGCCAGGAACATCTTGGTGAGTCAGAACCTGTGCTGCAAGGTGTCTGACTTTGGCCTGACCCGCCTCCTGGACAACTTTGATGGCACCTATGAAACCCAGGGAGGAAAGATTCCCATCCGTTGGACAGCCCCCGAAGCCATTGCCCACCGGATCTTCACCACAGCCAGCGACGTGTGGAGCTTTGGGATCGTGATGTGGGAGGTGCTCAGCTTTGGGGACAAGCCCTATGGGGAGATGAGCAATCAGGAGGTAATGAAGAGCATTGAGGATGGGTACCAGCTGCCCCCGCCCGTGGACTGCCCTGCCCCCCTCTATGAACTCATGAAGAACTGCTGGGCCTATGACTGTGCCCGTCGGCCCCCCTTCCACCGGCTGAAGGCACAGCTGGAGCATCTGCATGCCAACCCCCACTCCCTGCGAACCATTGCCAACTTTGATCCCAGGGTGACCCTTCGCTTGCCCAGCTTGAGTGGCTCAGATGGGATCCCCTACCGGAGCGTGGCTGAATGGCTGGAGTCCATCCGAATGAAACGCTACATCCTGCACTTCCACTCCGCCGGGCTGGACACCATGGAGTGTGTGCTGGATCTGACGGCCGAGGACCTGGCGCAGATGGGGATCACACTGCCGGGACACCAGAAGCGCATTCTTTGCAGTATTCAGGGGTTCAAGGACTGA

Related Sequences

bmy_15497T0 SequenceType object (3)

Length: 952 aa      View alignments
>bmy_15497T0
MDTSKAQGELGWLLDPPEDGWSEVQQILNGTPLYMYQDCPVQESRDTDHWLRSNWIYRGEEASRVHVELQFTVRDCKSFPGEAGPLGCKETFNLLYMESDQDVGVQLRRPLFQKVTTVAADQSFTIRDLASGAVKLNVERCSLGHLTRRGLYLAFHNPGACVALVSVRVFYQRCPETVHGLAQFPDTLPGPGGLAEVAGTCLPHAHVTPGPSGAPRMHCSPDGQWLVPVGRCHCEPGYEEGGGGGVEGCLACPKGFYRADVNTPSCLKCPQHSTAESEGATMCTCESGHYRVPGEGPAAACTRPPSVPRNLSFSVSGTQLSLRWEPPVDLGGREDVRYDVGCSQCRGAALDGEPCQPCGGSVRFSPGPSGLTSAAVCVDGLDPDANYTFNVEAQNGVSELGASKPASASLSISMGRAETPSGLSLRLVKKAPRQLELTWAGSRPRSPGGNLSYELHVLNQDEERYQLVLEPRVLLTELQPDTTYTVRVRMVTPLGPGPFSPDHEFRTSPPVSRVVTGGEIVAIICGLLLGVALLLGMLVFRSRKAQRRRHQRRQRQRDRVADGDREDKLWLKPYVDLQAYEDPAQGALDFTQELDPAWLVVDTVIGEGEFGEVYRGSLRITGQDAKTVAIKTLKDTSPDGQWWNFLREATIMGQFSHPHVLHLEGVVTKRKPIMIITEFMENGALDAFLREREDQLVPGQLVAMLQGIASGMNYLSDHSYVHRDLAARNILVSQNLCCKVSDFGLTRLLDNFDGTYETQGGKIPIRWTAPEAIAHRIFTTASDVWSFGIVMWEVLSFGDKPYGEMSNQEVMKSIEDGYQLPPPVDCPAPLYELMKNCWAYDCARRPPFHRLKAQLEHLHANPHSLRTIANFDPRVTLRLPSLSGSDGIPYRSVAEWLESIRMKRYILHFHSAGLDTMECVLDLTAEDLAQMGITLPGHQKRILCSIQGFKD*