Sequence details bmy_15505 (Coding sequence)

Part of scaffold_1177 (Scaffold)

For more information consult the page for scaffold_1177 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HDAC1 ENSTTRG00000001613 (Bottlenosed dolphin)

Gene Details

histone deacetylase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001520, Bottlenosed dolphin)

Protein Percentage 85.82%
cDNA percentage 74.31%
Ka/Ks Ratio 0.0054 (Ka = 0.0799, Ks = 14.7874)

HDAC1 ENSBTAG00000012698 (Cow)

Gene Details

Histone deacetylase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016877, Cow)

Protein Percentage 83.65%
cDNA percentage 72.47%
Ka/Ks Ratio 0.00624 (Ka = 0.0969, Ks = 15.5344)

Genome Location

Sequence Coding sequence

Length: 1503 bp    Location:374821..429479   Strand:+
Raw sequence 
>bmy_15505
ATGGAAAGTGACGACCAGTTCTATAAATATCAAGAGGTCAAGGTGAAAGTCAGCGTTGAAAGAACCAGCTATAAATCTAATAAGTGGCAAAGAAACAGACGGTTTTTATGGAAAAGTGATATTGGAAATTATTATTATGGACAGGGTCATCCCATGAAACCTCATAGGATCCGCATGACCCATAACTTGCTGCTAAATTATGGCTTGTWTAGAAAAATGGAAATATATAGGCCCCATAAAGCCACTGCTGAAGAAATGACAAAATACCACAGCGATGAGTACATCAAATTTCTACGTTCAATAAGACCAGATAACATGTCCGAGTATAGTAAGCAGATGCAGAGATTTAATGTTGGAGAGGATTGTCCAGTGTTTGATGGACTCTTTGAGTTTTGTCAGCTTTCAACTGGTGGTTCGGTTGCTGGGGCTGTGAAGTTAAACCGACAACAAACTGATATGGCTGTTAACTGGGCTGGAGGATTACATCATGCTAAGAAATCAGAAGCATCAGGATTCTGTTATGTTAATGATATTGTGCTTGCCATCCTTGAATTACTAAAGTATCATCAGAGAGTCTTATATATTGATATTGATATCCATCATGGTGATGGTGTTGAAGAAGCTTTTTATACAACAGATCGTGTAATGACTGTATCATTCCATAAATATGGGGAATACTTTCCTGGAACGGGAGACTTGAGGGATATTGGTGCAGGAAAAGGCAAATACTATGCTGTCAATTTTCCAATGAGAGATGGTATAGATGATGAATCATATGGGCAGATATTTAAGCCTATTATCTCAAAAGTGATGGAGATGTATCAACCTAGTGCTGTGGTGCTACAGTGTGGTGCAGACTCACTATCCGGTGATAGACTTGGTTGCTTCAATTTGACAGTCAAAGGTCATGCTAAATGTGTAGAAGTTGTAAAAACTTTCAATTTACCATTACTGATGCTTGGGGGAGGTGGATACACAATCCGCAATGTTGCTCGATGTTGGACATACGAGACTGCTGTTGCCCTTGATTGTGAGATTCCCAATGAATTGCCATATAATGATTACTTTGAGTATTTTGGACCAGACTTCAAACTGCATATTAGTCCTTCAAACATGACAAACCAGAACACTCCAGAATATATGGAAAAGATAAAACAGCGTTTATTTGAAAATTTACGCATGTTGCCACATGCACCTGGYGTCCAAATGCAAGCTATTCCGGAAGATGCAGTTCATGAAGACAGTGGAGATGAAGATGGAGAAGATCCAGACAAGAGAATTTCTATTCGAGCATCAGACAAACGGATAGCTTGTGATGAAGAATTCTCAGATTCTGAGGACGAAGGAGAGGGAGGTCGTAGAAATGTGGCTGATCATAAGAAAGGAGCAAAGAAAGCTAGAATTGAAGAAGACAAGAAGGAAACGGAGGACAAAAAAACAGATGTTAAAGAAGAAGATAAATCCAAGGACAATAGTGGTGAAAAAACAGATACCAAAGGGTAA

Related Sequences

bmy_15505T0 Protein

Length: 501 aa      View alignments
>bmy_15505T0
MESDDQFYKYQEVKVKVSVERTSYKSNKWQRNRRFLWKSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLXRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKTDVKEEDKSKDNSGEKTDTKG*