Part of scaffold_1217 (Scaffold)

For more information consult the page for scaffold_1217 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PANX1 ENSTTRG00000002347 (Bottlenosed dolphin)

Gene Details

pannexin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002199, Bottlenosed dolphin)

Protein Percentage 90.7%
cDNA percentage 91.74%
Ka/Ks Ratio 0.41458 (Ka = 0.0668, Ks = 0.1612)

PANX1 ENSBTAG00000012010 (Cow)

Gene Details

pannexin 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015932, Cow)

Protein Percentage 78.19%
cDNA percentage 83.29%
Ka/Ks Ratio 0.36358 (Ka = 0.1404, Ks = 0.3861)

PANX1  (Minke Whale)

Gene Details

pannexin 1

External Links

Gene match (Identifier: BACU018610, Minke Whale)

Protein Percentage 90.73%
cDNA percentage 92.79%
Ka/Ks Ratio 0.58217 (Ka = 0.066, Ks = 0.1134)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1071 bp    Location:461473..454314   Strand:-
>bmy_15518
ATGCCAGAACCCCAAAGGGAAGCAGCTGCGTTGGGAGGAGACACCATGTGTCACCATGTAGTTGCCAGTGATTTCAAAGTCAAGTCTATCGAAGTGGAGGGGGGAAAGTTTTTCCCCTACATCCTGTTACTGGTGGCCATCCTGCTGTACCTTCCCTCCCTGTTCTGGCGTTTCGCAGCTGTTCCTCATCTTTGCTCAGATTTGAAATTTATCATGGAAGAACTTGACAAAGTTTACAACCGCGCAATTAGAGCTGCGAAGAGCGTGCGTGACCTGGACTTGAGAGACGGTGCCTGCCCAGCTCGAGAAGTTAATGAGAACCTGGGGCAAAGTTTGTGGGAGATATCAGAAAGCCACTTCAAGTACCCAATTGTGGAGCAGTACTTAAAGACAAAGAAAAACTCCAAAAATTTAATTGTCAAGTACATCAGCTGTCGGGTGCTGTCACTCAGCATTATACTGTTAGCAGGCGTCTACCTGGGCTATTACTTTAGCCTCTCCTCCCTCTCGGATGAGTTCATCTGCAACATCAAATCCGGCATCCTGAAAAATGACAGCACTGTCCCCGATCGGTTCCAGTGCAAACTCATTGCCGTCGGCATCTTCCAGTTGCTCAGTTTCATCAACCTCGTGGTGTATGTCGTGCTGGCTCCCCTGGTGGTCTACACGCTGTTTGTTCCATTCCGACAGAAGACRGATGTTCTCAAAGTGTATGAAATCCTGCCCACTTTTGACGTTCTGCATTTCAAGTCGGAAGGGTACAACGACTTGAGCCTCTACATTCTTTTCTTGGAGGAGAATATTAGTGAACTCAAGTCGTACAAGTGTCTTAAGGTTCTGGAGAATATTAAAAGCAGTTGTCAGGGCATTGACCCCATGCTTCTTCTGACAAACCTCGGCATGATCAAGATGGACGTGGTTGATGGCAAAAATCCTGAGCCCGTGGAGAGGATGGCAGAGGAGCAAGGGGACCAGACGGCAGATCTCAAAGATTTGAATGTACACAATGGAACGAAAATAAATAATGGAGAGCAGAATGCTCGACAGAGACTTCTGGATACTTCTTGCTGA

Related Sequences

bmy_15518T0 Protein

Length: 357 aa      View alignments
>bmy_15518T0
MPEPQREAAALGGDTMCHHVVASDFKVKSIEVEGGKFFPYILLLVAILLYLPSLFWRFAAVPHLCSDLKFIMEELDKVYNRAIRAAKSVRDLDLRDGACPAREVNENLGQSLWEISESHFKYPIVEQYLKTKKNSKNLIVKYISCRVLSLSIILLAGVYLGYYFSLSSLSDEFICNIKSGILKNDSTVPDRFQCKLIAVGIFQLLSFINLVVYVVLAPLVVYTLFVPFRQKTDVLKVYEILPTFDVLHFKSEGYNDLSLYILFLEENISELKSYKCLKVLENIKSSCQGIDPMLLLTNLGMIKMDVVDGKNPEPVERMAEEQGDQTADLKDLNVHNGTKINNGEQNARQRLLDTSC*