Part of scaffold_1181 (Scaffold)

For more information consult the page for scaffold_1181 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIP12 ENSTTRG00000015725 (Bottlenosed dolphin)

Gene Details

thyroid hormone receptor interactor 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014901, Bottlenosed dolphin)

Protein Percentage 95.12%
cDNA percentage 94.98%
Ka/Ks Ratio 0.27523 (Ka = 0.015, Ks = 0.0546)

TRIP12 ENSBTAG00000021653 (Cow)

Gene Details

probable E3 ubiquitin-protein ligase TRIP12

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037967, Cow)

Protein Percentage 97.28%
cDNA percentage 94.75%
Ka/Ks Ratio 0.09382 (Ka = 0.0167, Ks = 0.1775)

TRIP12  (Minke Whale)

Gene Details

thyroid hormone receptor interactor 12

External Links

Gene match (Identifier: BACU001375, Minke Whale)

Protein Percentage 98.01%
cDNA percentage 98.11%
Ka/Ks Ratio 0.35019 (Ka = 0.0132, Ks = 0.0378)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4824 bp    Location:478881..413239   Strand:-
>bmy_15544
ATGACCACTTCTGGGGAGAGTGAATCGGATGATTCCGAGATGGGACGATTGCAAGCTCTGTTAGAGGCCAGGGGTCTTCCTCCTCACCTGTTTGGTCCTCTTGGTCCTCGGATGTCACAACTTTTCCATAGAACAATTGGAAGCGGAGCTAGTTCTAAGGCCCAGCAGCTTCTGCAAGGACTACAAGCAAGCGATGAAAGCCAGCAACTCCAGGCAGTTATTGAGATGTGTCAGTTATTGGTCATGGGAAATGAGGAGACACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAGCTTTGATAACATTACTGCAGATGGAGCATAATTTTGATATTATGAACCACGCTTGTCGAGCCTTAACATACATGATGGAAGCACTTCCTCGATCATCCGCTGTTGTAGTAGATGCAATTCCTGTCTTTTTAGAAAAGCTGCAAGTTATTCAGTGTATTGATGTGGCAGAGCAGGCCTTGACGGCCTTGGAGATGTTATCACGTAGACACAGTAAAGCCATTCTACAGGCGGGTGGTTTGGCAGACTGCTTGCTGTATCTAGAGTTCTTCAGCATAAATGCCCAAAGGAATGCACTAGCAATTGCAGCCAATTGCTGCCAGAGTATCACGCCAGATGAATTTCATTTTGTGGCAGATTCCCTCCCATTGCTAACCCAAAGGCTAACCCACCAGGACAAAAAGTCAGTAGAAAGCACTTGCCTTTGTTTTGCACGTCTCGTGGACAACTTCCAACATGAGGAGAATTTACTCCAGCAGGTTGCCTCCAAAGATCTGCTAACAAATGTTCAACAACTATTGGTAGTAACTCCACCAATTCTAAGTTCTGGGATGTTTATAATGGTGGTTCGCATGTTTTCTTTGATGTGTTCCAACTGTCCAACTTTAGCGGTTCAACTCATGAAGCAAAACATTGCAGAAACGCTTCACTTTCTCCTGTGTGGTGCCTCCAATGGAAGTTGTCAGGAACAGATTGATCTTGTTCCACGAAGTCCTCAAGAACTTGAACTTATGCCATGTTTACCAAAAGAAGGCATTTTTGCAGTTGATACCATGCTGAAGAAGGGAAATGCACAGAACACAGATGGTGCGATATGGCAGTGGCGTGATGACCGGGGCCTTTGGCATCCCTATAACAGGATTGACAGCCGGATCATTGAGGCAGCCCATCAGGTCGGTGAGGATGAGATAAGCTTGTCCACTCTGGGACGAGTTTATACTATTGATTTTAATTCTATGCAGCAAATCAATGAGGACACGGGAACAGCACGTGCCATTCAGAGAAAACCTAACCCCTTAGCCAATACTAACAGTAGTGGATATTCAGAGTTAAAGAAGGATGATGCTCGAGCACAGCTTATGAAAGAGGATCCGGAACTGGCTAAGTCTTTTATTAAGACATTATTTGGTGTTCTTTATGAAGTGTATAGTTCCTCAGCAGGACCTGCGGTCAGACATAAGTGCCTTAGAGCAATTCTTAGGATAATTTATTTCGCGGATGCCGAACTTCTAAAGGATGTCCTGAAAAATCATGCTGTTTCAAGTCATATTGCTTCCATGCTATCAAGCCAAGACCTGAAGATAGTAGTTGGAGCACTTCAGATGGCAGAGATCTTAATGCAGAAGTTACCTGATATTTTTAGTGTTTATTTCAGAAGAGAAGGTGTAATGCATCAAGTAAAACACTTAGCAGAATCGGAATCATTGTTGACAAGTCCACCAAAGGCATGTACGAATGGGTCAGGATCCTTGGGGTCCACGACATCTGTCAGCAGTGGAACAGCCACGGCTGCCACTAACGCCTCAGCTGACTTGGGGTCCCCCAGCTTGCAGCACAGCAGAGATGATTCTTTAGATCTGAGCCCTCAAGGTCGATTAAGTGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGATCAAGAAGGCCAAAGTATTCACCTCCAAGAGATGATGACAAAGTAGACAATCAAGCTAAAAGCCCCACCACTACTCAGTCACCTAAATCTTCTTTCCTGGCAAGYTTGAATCCAAAAACGTGGGGAAGGTTAAGCGCACAGTCTCACAGCAACAACATTGAACCGGCCCGAGCTGCGGGAGTTAGTGGTCTTGCCAGGGCCGCCTCAAAGGACACCATATCCAATAACAGAGAAAAAATCAAAGGCTGGATTAAAGAGCAGGCGCATAGATTTGTAGAGCGTTATTTCAGTTCTGAGAACATGGATGGAAGCAACCCTGCATTGAACGTCCTGCAGAGACTTTGTGCTGCAACTGAACAACTCAACCTCCAGGTGGATGGTGGAGCTGAGTGCCTTGTAGAAATCCGTAGCATAGTCTCAGAGTCGGATGTTTCATCATTTGAAATCCAACATAGTGGATTTGTGAAGCAGCTATTGCTTTATTTGACATCTAAAAGCGAAAAGGATGCTGTGAGCAGAGAGATCAGATTAAAGAGATTCCTTCATGTATTTTTTTCTTCTCCACTTCCTGGAGAAGAGCCCATTGGAAGAGTAGAACCAGTGGGTAATGCACCTTTGTTGGCATTAGTTCACAAGATGAACAACTGCCTCAGCCAGATGGAACAGTTTCCAGTCAAAGTGCATGACTTTCCGAGTGGAAATGGCACAGGAGGCAGAGGATCACAGGCTTTAAAATTTTTCAACACACATCAGTTAAAATGCCAGTTACAGAGACATCCAGACTGTGCAAATGTGAAGCAGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGCTTTGGTGCAAGCTATCGAGAGATACCTTGTAGTTAGAGGGTATGGAAGAGTAAGAGAAGATGATGAAGACAGTGACGATGATGGCTCTGATGAGGAAATAGACGAGTCTCTGGCTGCTCAATTCTTAAATTCAGGAAATGTACGACACAGGCTACAGTTTTACATCGGAGAACATTTGCTACCGTATAACATGACTGTGTATCAGGCAGTACGGCAGTTCAGCATACAGGCTGAAGATGAACGGGAATCCACGGATGATGAGAGCAATCCTCTAGGAAGAGCTGTCTACTTGAAAATGTACAAACCCGTGAGAGAAGATGAAGAAAGCAATAAAGATTGTGTTGGTGGTAAAAGAGGAAGAGCCCAAACAGCTCCAACAAAAACTTCCCCTAGAAATGCAAAAAAGCACGATGAGTTGTGGAACGATGGAGTGTGCCCGTCAGTATCAAATCCTTTAGAAGTTTACCTCATACCCACACCACCTGAAAATATAACTTTTGAAGACCCTTCATTAGATGTGATTCTTCTTTTAAGAGTTTTACATGCCATCAGTCGATACTGGTATTACTTGTATGATAATGCAGTGTGCAAGGAGATTATCCCAACTAGTGAATTTATTAACAGTAAGTTGACAGCAAAAGCAAATAGGCAGCTTCAGGATCCTTTAGTAATCATGACAGGAAACATCCCAACATGGCTTACTGAACTAGGAAAAACCTGCCCGTTTTTCTTCCCTTTTGATACCCGGCAAATGCTTTTTTATGTAACTGCATTTGATCGGGACCGAGCAATGCAAAGATTACTTGATACCAACCCAGAAATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGCACCTAGATTGGATAGAAAAAAACGTACTGTGAACAGAGAGGAGCTGCTGAAACAAGCAGAGTCTGTGATGCAGGATCTTGGCAGCTCACGGGCCATGTTAGAAATTCAGTATGAAAATGAGGTTGGCACGGGTCTGGGGCCTACACTGGAGTTTTATGCACTTGTATCTCAGGAACTACAGAGAGCTGACTTGGGTCTCTGGAGAGGGGAAGAAGTAACTCTTAGCAATCCAAAAGGAAGCCAAGAAGGGACCAAGTATATTCAAAACCTCCAAGGCCTGTTTGCGCTTCCCTTTGGTAGGACAGCTAAGCCAGCTCATATCGCAAAAGTTAAGATGAAGTTTCGCTTCTTAGGAAAATTAATGGCCAAGGCTATCATGGATTTCAGATTGGTGGACCTTCCCCTGGGCTTACCTTTTTATAAATGGATGCTACGGCAAGAAACTTCGCTGACGTCACACGATTTGTTTGACATTGACCCAGTTGTAGCCAGATCAGTGTATCACCTAGAAGACATTGTCAGACAGAAGAAAAGACTTGAACAAGATAAATCCCAGACCAAAGAGAGTCTACAGTATGCATTAGAAACCCTGACTATGAATGGCTGCTCAGTTGAAGATCTAGGATTGGATTTCACTCTGCCAGGGTTTCCCAACATCGAACTGAAGAAAGGAGGAAAGGATATACCGGTCACCATCCACAATTTGGAGGAGTATCTAAGACACGCCACAGAACAGAACATGCGTGCATTTTCAGTCCGTTACACAGCTGTGTCCTTAGTAATCTGTTGCCCGTGTTTAAACACACAGCTGGATCAACTCCTGTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGGAATGCTGCAGGCCAGATCACGGTTATACTCATGACAGTCGGGCTGTGAAGTTCTTGTTTGAGATTCTCAGTAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCCAGTTTGTGACAGGTAGCCCAAGATTGCCTGTTGGAGGCTTCCGGAGCTTGAATCCACCTTTGACAATTGTCCGGAAGACCTTCGAATCAACAGAGAACCCAGATGACTTCCTGCCCTCCGTAATGACCTGTGTGAACTATCTTAAGTTGCCGGACTATTCGAGCATCGAGATAATGCGAGAAAAGCTGTTGATGGCAGCGAGGGAAGGGCAGCAGTCATTCCATCTTTCCTGA

Related Sequences

bmy_15544T0 Protein

Length: 1608 aa      View alignments
>bmy_15544T0
MTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNSSGYSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPPKACTNGSGSLGSTTSVSSGTATAATNASADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGSRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSHSNNIEPARAAGVSGLARAASKDTISNNREKIKGWIKEQAHRFVERYFSSENMDGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGGRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRAVYLKMYKPVREDEESNKDCVGGKRGRAQTAPTKTSPRNAKKHDELWNDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRHATEQNMRAFSVRYTAVSLVICCPCLNTQLDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLMAAREGQQSFHLS*