Part of scaffold_1171 (Scaffold)

For more information consult the page for scaffold_1171 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SORT1 ENSTTRG00000009559 (Bottlenosed dolphin)

Gene Details

sortilin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009060, Bottlenosed dolphin)

Protein Percentage 99.02%
cDNA percentage 98.58%
Ka/Ks Ratio 0.11005 (Ka = 0.0046, Ks = 0.0415)

SORT1 ENSBTAG00000008849 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011652, Cow)

Protein Percentage 97.88%
cDNA percentage 94.93%
Ka/Ks Ratio 0.05627 (Ka = 0.0101, Ks = 0.1795)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1839 bp    Location:4946..45219   Strand:+
>bmy_15546
ATGATGTATAGTCCTCAGAATTCTGATTATCTTTTAGCTCTCAGCACTGAAAATGGCCTGTGGGTGTCCAAGAATTTTGGGGGAAAATGGGAAGAAATCCACAAAGCAGTATGTTTGGCCAAATGGGGATCAGAAAACACCATCTTCTTTACCACCTATGTGAATGGCTCCTGCAAAGCTGACCTTGGGGCACTGGAATTACGGAGAACTTCAGACTTGGGAAAAAGCTTCAAAACCATTGGTGTGAAAATCTACTCATTTGGTCTTGGGGGACGTTTCCTTTTTGCCTCTGTGATGGCTGATAAGGATACAACAAGAAGGATTCATGTGTCAACAGATCAAGGGGACACATGGAGCATGGCCCAGCTCCCCTCTGTGGGGCAGGAACAATTCTATTCTATTCTAGCAGCTAATGATGACATGGTGTTCATGCATGTAGACGAACCTGGAGATACCGGATTTGGCACTATATTTACCTCGGATGATCGAGGCATTGTCTATTCCAAGTCCTTGGACCGACATCTCTACACAACCACAGGTGGTGAGACAGACTTTACCAACGTGACCTCCCTCCGTGGGGTCTACATGACAAGTGTGCTCTCAGAAGATAATTCTATCCAGACTATGATCACTTTTGACCAAGGAGGAAGGTGGAAGCACCTGAGGAAGCCTGAGAACAGTGAATGCGATGCTACTGCAAAAAATAAGAACGAGTGCAGCCTTCATATTCACGCTTCCTACAGCATCTCCCAGAAACTAAACGTTCCAATGGCCCCTCTCTCAGAGCCTAATGCTGTTGGCATAGTCATCGCCCACGGTAGCGTGGGGGATGCCATCTCAGTGATGATCCCAGATGTGTACATCTCAGATGATGGGGGTTACTCCTGGCTGAAGATGCTGGAAGGACCTCACTATTACACCATCCTGGATTCCGGAGGCATCATTGCAGCCATCGAGCACAGCAGCCGTCCTATCAATGTGATTAAGTTCTCCACAGACGAGGGTCAGTGCTGGCAAACCTACATGTTTACCAGGGAGCCTATCTACTTCACTGGCCTGGCTTCAGAACCCGGAGCTAAGTCCATGAACATCAGCATCTGGGGTTTCACAGAATCTTTCCTGACTCGCCAGTGGGTCTCCTACACCATCGATTTTAAAGATATCCTTGAAAGGAACTGTGAAGAGAAGGACTATACCATATGGCTGGCTCACTCCACAGACCCTGGAGATTATGGAGATGGCTGCATTTTAGGCTATAAAGAACAGTACCTACGGCTACGCAAGTCGTCAGTCTGTCAGAATGGTCGGGACTATGTTGTGACCAAGCAGCCGTCCGTCTGTCCCTGCTCCCTGGAGGACTTCCTCTGTGATTTTGGCTACTTCCGTCCAGAAAATGACTCCAAGTGTGTGGAACAGCCAGAACTGAAGGGCCACGACCTAGAGTTTTGTTTGTACGGGAGAGAAGAGCACCTGACGACAAATGGGTACCGGAAAATTCCAGGAGACAGATGCCAGGGCGGAGTGAATCCTGTTCGAGAAGTGAAAGACTTGAAAAAGAAGTGCACAAGCAACTTTCTGAGTCCCGAGAAGCAGAATTCCAAGTCAAATTCTGTTCCGATTATCCTGGCTACTGTGGGATTGATGCTGGTCACAGTCGTAGCAGGAGTGCTCATTGTGAAGAAATACGTCTGTGGGGGAAGGTTCCTGGTGCATCGATACTCTGTGCTCCAGCAACATGCGGAGGCCAATGGTGTGGATGGTGTGGATGCTTTGGACACAACCTCCCACACTCATAAAAGTGGTTATCATGATGACTCAGATGAGGACCTCCTGGAATAG

Related Sequences

bmy_15546T0 Protein

Length: 613 aa      View alignments
>bmy_15546T0
MMYSPQNSDYLLALSTENGLWVSKNFGGKWEEIHKAVCLAKWGSENTIFFTTYVNGSCKADLGALELRRTSDLGKSFKTIGVKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYMTSVLSEDNSIQTMITFDQGGRWKHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMIPDVYISDDGGYSWLKMLEGPHYYTILDSGGIIAAIEHSSRPINVIKFSTDEGQCWQTYMFTREPIYFTGLASEPGAKSMNISIWGFTESFLTRQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPGDYGDGCILGYKEQYLRLRKSSVCQNGRDYVVTKQPSVCPCSLEDFLCDFGYFRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDRCQGGVNPVREVKDLKKKCTSNFLSPEKQNSKSNSVPIILATVGLMLVTVVAGVLIVKKYVCGGRFLVHRYSVLQQHAEANGVDGVDALDTTSHTHKSGYHDDSDEDLLE*