Part of scaffold_1171 (Scaffold)

For more information consult the page for scaffold_1171 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLCC1 ENSTTRG00000003164 (Bottlenosed dolphin)

Gene Details

chloride channel CLIC-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002966, Bottlenosed dolphin)

Protein Percentage 83.12%
cDNA percentage 84.77%
Ka/Ks Ratio 0.65055 (Ka = 0.0421, Ks = 0.0647)

CLCC1 ENSBTAG00000017129 (Cow)

Gene Details

Chloride channel CLIC-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022767, Cow)

Protein Percentage 87.55%
cDNA percentage 91.45%
Ka/Ks Ratio 0.36379 (Ka = 0.0658, Ks = 0.181)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1755 bp    Location:311801..327172   Strand:+
>bmy_15557
ATGCTGTGCTCTGTGCTCTTTTGTGAATGTCTGTGGCTGATAACTTCTTATGCTCATGATGATGACTGGATTGACCCCACAGACATGCTTAACTATGATGCTGCTTCAGGAACAATGAGAAAATCTCAGGTGAAGTATGGTATATCAGAGAAAGAAGAGGTCAGTCCTGACTTATCACATGCTGATGAATTGTCAGAATGTTACAGCAGACTTGATTCTTTAACTCATAAGATCGATGAGTGTGAAAAGCAGAAGAGAAAAGACTATGAAAGTCAAAGCAATCCTGTTTTTAGGAGATACTTAAATAAGATTTTAATTGAAACCAGAAAGCTTGGCCTTCCTGATGAAAACAAAGTTGATATGCATTATGATGCCGAGATTATCCTTAAAAGACAAACCTTGTTAGAAATACAAAAGTTTCTCAGTGGAGAGGATTGGAAGCCAGGAGCCTTGGATGATGCACTAAGTGATATTTTAATTAATTTTAAGTTTCATAATTTTGAAACATGGAAGTGGCAATTTGAAGATTCCTTTGGAGTGGATCCATATAATGTATTGATGATGCTTCTGTGTCTGCTCTGCATCATGATGTTAGTAGCTACTGAGCTGTGGACGTATGTTCGTTGGTACACCCAGTTGAGACGTGTTTTATTCATCAGTTTTCTCATCAGTTTGGGATGGAATTGGATGTATTTATATAAGCTAGCCTTTGCCCAGCATCAGGCTGAAGTTGCCAAGATGGAGCCATTAAACAATGTGTGTGCTGAGAACATGGATTGGACGGGAAGTCTCTTGGAATGGCTTAGAAGTTCATGGACCTATAAGGATGACTCGTGCCAAAAATACTATGAGCTCTTATTAGTCAACCCTGTTTTGTTGGTCCCACCAACAAAGGCACTAGCAGTTACATTCACCAACTTTGTCACGGAGCCATTGAAGCATATTGGAAAAGGAGTTGGTGAATTTATTAAAGCACTCATGAAGGAGATCCCAGTGTTACTACACATTCCAGTGCTGATAATTATGGCATTAGCTGTCCTGAGTTTCTGCTATGGTGCTGGAAAATCAGTTACTATGCTGAGACATGTGGGTGGTCCTGAAAGAGAACCACCCCAGGCACTTCAGCCAGGTGAAAGAAGATGGCAGCAGGAAATTGATTATAGACCCCATGGTGGAGCAGGTGATGCAGATTTCTATTATAGGGGCCAAATTGGCCCCATTGAGCAAGGCCCTAATGACAAAACACGTGAGGGTAGAAGAGATGTTTTGAGAGAGAGAGATGTTGACTTAAGATTTCAGACTGGCAACAAGAGCCTTGAAGTGCTTCCGGCATTTGATTTACCAGACGCAGAGGCGAGAGAGCATCCCAAGGTGGTACCCAGCCATAAATCACCTATTTTGGATACAAAGCCCAAAGAAATTGGTGGAATCTCAGGAGAAAGCACACTGACTGAAAGCAGCCAGTCTGCTAAGCCTGTCTCTGGCCAAAAGATACCAGAGAGTGTGGAAGGTTCCCCTGCAGTGGAAAAGGCCCAGCTCAGGACTGACGCCACAGGCGGCCCAGAGGAAGGCAGCACATCCAGCCCAGCAAGCACTGCAGTGAGGCATTTTAGTGCAGCCACGGAGTCTGCGTCACCAGTGTCAGTCTGCCTCGTCTTAGTACTGCAAACATTAGTATTTCATCAGAAAGATAACCATTTGGGGATGAAATCTACTTTGACAGCAAGGCAGCAAGGTACTGCTGTTGAAAGGTGA

Related Sequences

bmy_15557T0 Protein

Length: 585 aa      View alignments
>bmy_15557T0
MLCSVLFCECLWLITSYAHDDDWIDPTDMLNYDAASGTMRKSQVKYGISEKEEVSPDLSHADELSECYSRLDSLTHKIDECEKQKRKDYESQSNPVFRRYLNKILIETRKLGLPDENKVDMHYDAEIILKRQTLLEIQKFLSGEDWKPGALDDALSDILINFKFHNFETWKWQFEDSFGVDPYNVLMMLLCLLCIMMLVATELWTYVRWYTQLRRVLFISFLISLGWNWMYLYKLAFAQHQAEVAKMEPLNNVCAENMDWTGSLLEWLRSSWTYKDDSCQKYYELLLVNPVLLVPPTKALAVTFTNFVTEPLKHIGKGVGEFIKALMKEIPVLLHIPVLIIMALAVLSFCYGAGKSVTMLRHVGGPEREPPQALQPGERRWQQEIDYRPHGGAGDADFYYRGQIGPIEQGPNDKTREGRRDVLRERDVDLRFQTGNKSLEVLPAFDLPDAEAREHPKVVPSHKSPILDTKPKEIGGISGESTLTESSQSAKPVSGQKIPESVEGSPAVEKAQLRTDATGGPEEGSTSSPASTAVRHFSAATESASPVSVCLVLVLQTLVFHQKDNHLGMKSTLTARQQGTAVER*