Part of scaffold_1183 (Scaffold)

For more information consult the page for scaffold_1183 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APOE ENSTTRG00000008712 (Bottlenosed dolphin)

Gene Details

apolipoprotein E

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008256, Bottlenosed dolphin)

Protein Percentage 94.49%
cDNA percentage 96.33%
Ka/Ks Ratio 0.12071 (Ka = 0.0222, Ks = 0.1837)

APOE ENSBTAG00000010123 (Cow)

Gene Details

Apolipoprotein E

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013354, Cow)

Protein Percentage 80.08%
cDNA percentage 87.85%
Ka/Ks Ratio 0.16133 (Ka = 0.0925, Ks = 0.5735)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 711 bp    Location:126277..129042   Strand:+
>bmy_15580
ATGGATGAGACCATGAAGGAGGTGAAGGCCTATAGGGAGGAGCTGGAGGAGCAGCTGGGCCCCATCGCCCAGGAGACGCAGGCCCGTGTGTCCAAGGAGCTGCAGGCAGCGCAGGCCCGGCTGGCCTCTGACATGGAGGACGTGCGCAGCCGCCTGGCGCAGTACCGCAGCGAGGTGCAGGCCATGATGGGCCAGACCACTGACGAGCTGCGTGGCCGCCTGGCCTCTCACCTGCGCAAGCTGCGCAAACGGCTGCTCCGCGACGCCGAGGACCTGCAGAAGCGCCTGGCCGTGTACCGCGCAGGGGCGCTCGAGGGCTCAGAGCGCAGCGTGAGCGCCATCCGCGAACGCCTCGGGCCCCTGATGGAGCAGGGCCGAGCGCGGGCCGCCACCGTGGGAACCCTGGCCAGCCAGACGCTGAGGGAGCGCGCCGAGGCCTGGCACCAGAAACTGCGCGGGCGGGTGGAGGAGGTGGGCACCCAGGCCCGGGACCACCTGGAGGAGATGCGCGAGCAGCTGGAGGAGGTGCGCGCTAAGGTGGAGGAGCAGGGCAGCCAGATACGCCTGCAGGCGGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCTGGTGGAAGACATGCAGCGCCAGTGGGCTGGGCTGGTGGAGAAGGTGCAGTTGGCTATGGCCACCAGCTCCACCTCTGCGCCCAGCGAGAATCACTGA

Related Sequences

bmy_15580T0 Protein

Length: 237 aa      View alignments
>bmy_15580T0
MDETMKEVKAYREELEEQLGPIAQETQARVSKELQAAQARLASDMEDVRSRLAQYRSEVQAMMGQTTDELRGRLASHLRKLRKRLLRDAEDLQKRLAVYRAGALEGSERSVSAIRERLGPLMEQGRARAATVGTLASQTLRERAEAWHQKLRGRVEEVGTQARDHLEEMREQLEEVRAKVEEQGSQIRLQAEAFQARLKSWFEPLVEDMQRQWAGLVEKVQLAMATSSTSAPSENH*