Part of scaffold_1183 (Scaffold)

For more information consult the page for scaffold_1183 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLPTM1 ENSTTRG00000008699 (Bottlenosed dolphin)

Gene Details

cleft lip and palate associated transmembrane protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008248, Bottlenosed dolphin)

Protein Percentage 84.15%
cDNA percentage 84.35%
Ka/Ks Ratio 0.15691 (Ka = 0.0343, Ks = 0.2189)

BT.91082 ENSBTAG00000020560 (Cow)

Gene Details

cleft lip and palate transmembrane protein 1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027395, Cow)

Protein Percentage 95.33%
cDNA percentage 93.04%
Ka/Ks Ratio 0.05328 (Ka = 0.0245, Ks = 0.4595)

CLPTM1  (Minke Whale)

Gene Details

cleft lip and palate associated transmembrane protein 1

External Links

Gene match (Identifier: BACU018296, Minke Whale)

Protein Percentage 91.84%
cDNA percentage 92.75%
Ka/Ks Ratio 0.17982 (Ka = 0.0492, Ks = 0.2737)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1488 bp    Location:164705..176682   Strand:+
>bmy_15582
ATGAGGGGCTTCACTGTTCCTTGTCCCCGTCGGACCGCCTTGCAGAGCGTCCAGCAGAACGGCTCCATCTATATCCACGTCTACTTCACCAAGAGCGGCTTCCACCCAGACCCCCGGCAGAAGGCGCTGTACCGCCGGCTCGCCACGGTCCACATGTCTCGGATGATCAACAAATACAAGCGCCGGCGGTTTCAGAAAACCAAGAACCTGTTGACAGGAGAGACGGAAGCTGACCCAGAAATGATCAAGAGGGCCGAGGATTATGGGCCTGTGGAGGTGATCTCCCACTGGCACCCCAACATCACCATCAACATTGTGGACGACCACACGCCGTGGGTGAAGGGCAGCGTGCCTCCTCCCCTGGACCAGTATGTGAAGTTTGATGCCGTGAGCGGTGACTACTACCCCATCATCTACTTCAACGACTACTGGAACCTGCAGAAGGACTACTACCCCATCAACGAGAGTCTGGCCAGCCTACCGCTCCGCGTCTCCTTCTGCCCGCTCTCGCTCTGGCGCTGGCAGCTCTACGCCGCCCAGAGCACCAAGTCGCCCTGGAACTTCCTGGGCGACGAGCTGTACGAGCAGTCAGATGAGGAGCAGGACTCGGTGAAGGTTGCCCTCCTGGAGACCAACCCCTACCTGCTGGCGCTCACCATCATCGTGTCCATTGTCCACAGTGTCTTTGAGTTCCTGGCCTTCAAGAACGATATCCAGTTCTGGAACAGCCGGCAGTCCCTGGAGGGCCTGTCCGTGCGCTCCGTCTTCTTTGGCGTCTTCCAGTCTTTCGTGGTCCTCCTCTATATCCTGGACAACGAGACCAACTTCGTGGTCCAGGTCAGCGTCTTCATCGGGGTCCTCATCGACCTCTGGAAGATCACCAAGGTCATGGATGTCCGGCTGGACCGGGAGCGCAAGGTGGCAGGGCTCTTCGCCCGCCCAACCTTCAAAGACAAGTCAACATACGTTGAGTCCTCGACCAAAGTGTATGACGACATGGCGTTCCGGTACCTGTCTTGGATCCTCTTCCCACTCCTGGGCTGCTATGCCGTCTACAGCCTCCTGTACCTGGAGCACAAGGGCTGGTACTCCTGGCTCAAGTCTGTGGCCCACCTGCCCTGGCGCATGCTCACCTACAAGGCCCTCAACACCTTCATTGATGACCTGTTCGCCTTCGTCATCAAGATGCCTGTTATGTACCGGATCGGCTGCCTGCGGGACGATGTGGTCTTCTTCATCTACCTCTACCAACGGTGGATCTACCGCGTCGACCCCACGCGGGTGAACGAGTTTGGCATGAGTGGCGAGGCCCCAACAGCAGCAGGGGCCCTCGCGCCGGCCCCCGCCCCCGCCACGACCACCGCCGCCGCCGCCGCCAGGGAGGAGGCCTCCACACCCCCGCCCGCCAGGCCCACCCAGGGGGCCAGCTCTGACAGCGAGCTCCAGGAAGCCCCTCCAAAGCCGGCAGAGGACAAAAAAAGGGATTAG

Related Sequences

bmy_15582T0 Protein

Length: 496 aa      View alignments
>bmy_15582T0
MRGFTVPCPRRTALQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKRRRFQKTKNLLTGETEADPEMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQLYAAQSTKSPWNFLGDELYEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDRERKVAGLFARPTFKDKSTYVESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWYSWLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEAPTAAGALAPAPAPATTTAAAAAREEASTPPPARPTQGASSDSELQEAPPKPAEDKKRD*