Sequence details bmy_15621 (Coding sequence)

Part of scaffold_1203 (Scaffold)

For more information consult the page for scaffold_1203 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CSTL1 ENSTTRG00000011318 (Bottlenosed dolphin)

Gene Details

cystatin-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010738, Bottlenosed dolphin)

Protein Percentage 93.38%
cDNA percentage 94.61%
Ka/Ks Ratio 0.15291 (Ka = 0.0287, Ks = 0.1878)

CSTL1 ENSBTAG00000032701 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043743, Cow)

Protein Percentage 78.2%
cDNA percentage 85.21%
Ka/Ks Ratio 0.24347 (Ka = 0.1179, Ks = 0.4843)

CSTL1  (Minke Whale)

Gene Details

cystatin-like 1

External Links

Gene match (Identifier: BACU014838, Minke Whale)

Protein Percentage 94.16%
cDNA percentage 95.86%
Ka/Ks Ratio 0.19468 (Ka = 0.025, Ks = 0.1286)

Additional orthologs identified in other species via the OPTIC pipeline.

CSTL1 (Human)   Cstl1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 438 bp    Location:599027..602292   Strand:+
Raw sequence 
>bmy_15621
ATGGGAGCTGGACCCTGGGGAAACCCTCTGCTGCTGCTGGTGGCCCTGGCCCTGGTGGCCAGGCTGGGTCAATTGCAACAGTGGAGCGGCTTCCAGGAGTCCACGAGCCCGAAGAACGTGAACTCCACCCTCGCCTTCTTCATGGAGACATACAACAACAATAGCAATGACTCCTACCTGTTCCGCGTGGACCAGCTGCTCCGAAGCCAGGTGCAGGTGAGAGCGGGTGCGCAGGGCCTCGTGGGCACAGGCGTGGAGTACCTAGTCACAGTGAAAATTAGCCGGACCAAGTGCAAGAGGAACAGCATGAGCAACACTTGGTGCCCCATTCAGAGCAAGAAGAAGCTGCATAAGAGTTTCATTTGTGACTTTCTGGTATACACTGTACCCTGGATGAACCATTACCAGCTCTGGAACAACTCCTGTCTGGATGCCTAG

Related Sequences

bmy_15621T0 Protein

Length: 146 aa      View alignments
>bmy_15621T0
MGAGPWGNPLLLLVALALVARLGQLQQWSGFQESTSPKNVNSTLAFFMETYNNNSNDSYLFRVDQLLRSQVQVRAGAQGLVGTGVEYLVTVKISRTKCKRNSMSNTWCPIQSKKKLHKSFICDFLVYTVPWMNHYQLWNNSCLDA*