Part of scaffold_1176 (Scaffold)

For more information consult the page for scaffold_1176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AOC2 ENSTTRG00000011727 (Bottlenosed dolphin)

Gene Details

amine oxidase, copper containing 2 (retina-specific)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011125, Bottlenosed dolphin)

Protein Percentage 58.28%
cDNA percentage 58.59%
Ka/Ks Ratio 0.26065 (Ka = 0.0173, Ks = 0.0663)

AOC2 ENSBTAG00000030334 (Cow)

Gene Details

retina-specific copper amine oxidase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040444, Cow)

Protein Percentage 93.65%
cDNA percentage 93.96%
Ka/Ks Ratio 0.2065 (Ka = 0.0325, Ks = 0.1572)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2310 bp    Location:34249..21012   Strand:-
>bmy_15643
ATGAATCTCAAGGTAGTCCTCGTGTTCCTGGCACTGTCCCTCATTACCGTCTTTGCCCTGGCCTATGTCTTGCTGACCAGCCAAGGTAGCTCCAGCCAGCCTCCCCGCTGCCCCTCTGTATCCTACAGTGCCCAGCCCTGGACACACCGTGGCCAGAGCCGGCTGTTTGCAGACCTGAGCCGAGAAGAGCTGACGGCTGTGATGAGCTTTCTGACCCAGAAGCTGGGGCCAGGCCTGGTGGATGCAGCTCAGGCCCACCCCTTCGACAACTGCGTCTTCTCAGTGGAGCTGCAGCTGCCCCCCAAGGCTGCAGCCCTGGCCTGCCTGGACAGGGGGAGCCCCCCGCCTGCCCGGGAAGCACTGGCCATCGTTTTCTTTGGTGGACAACCCCAGCCCAATGTGACTGAGCTGGTAGTGGGGCCGCTGCCGCACCCCTCCTACCTGCGGGATGTGACTGTGGAGCGTCACGGGGGCCCCCTGCCCTATCACCGACGCCCCGTGCTGGGAACTGAGTCTGCCCAGATGTGGAAGCATTTGAAAGAGGTGGAGCTCCCCAAGGCACCAGTCTTCCTGGCTTCTGTCTTCAACTACAGTGGCTCCACTTTGGCAGCTCTGCACGCCACCCCTCGTGGCTTGCGCTCAGGGGACCGTGCTACCTGGATAGCCCTCTACCATAACATCTCAGGTGTTGGGATCTTCCTTCACCCTGTGGGGCTCGAGCTACTGCTGGACCACAGGGCCCTGGACCCTGCCCGCTGGGCAGTCCAGCAGGTCTTCTACCTTGGGCACTACTATGCAGACTTGGGTCAGTTGGAATGGGAGTTTAAGGCTGGCCGGCTAGAAGTGGTTAGAGTTCCTCTACCCCTGCCAGTTGGGGCCTCATCGCTGCGATCGCGGGTCTCCCCAGGTCCTCTTCCCCCTCTTCAGTTCTCACCTCAGGGCTCCCGGTACAGTGTGCAAGGGAACCTAGTGGCGTCCTCCCTTTGGACGTTTACCTTTGGCCATGGGGTGTTCAGTGGCATGAGGATTTTTGATGTTCGGTTCAAGGGTGAGCGAGTGGCCTATGAAGTCAGTGTCCAGGAGTGTGTGTCTATCTATGGTGCTGATTCACCCAAGACAATGATGACCCGATACCTGGATAGCAGYTATGGACTTGGCCATCACAGCCGGGGCTTGGTGCGGGGAGTGGACTGCCCCTATCAGTCTACCATGGTGGACATCCACGTATTAGTGGGCAAAGGGGCAGTCCAGCTGCTCCCGGGGGCTGTGTGTGTGTTTGAGGAGGCCCAGGGACTACCCCTCCGCAGGCACCACAATCACCTTCAGAGTCATTTCTATGGTGGTTTGGCTGGCTCGGCCCTTGTAGTCAGGTCTGTGTCCTCTGTAGGCAACTATGACTACATTTGGGACTTTGTATTGCACCCAAATGGGGCACTTGAAGGGCGGGTCCATGCCACGGGCTACATCAACACAGCTTTCCTGAGCGGGGGCGAGGAGAGCCTCCTCTTTGGGAACCGCGTTGGGGAGCAAGTGCTGGGGGCGGTGCACACGCATGCCTTCCACTTCAAGCTGGACCTGGATGTGGCAGGGCTGAAAAACTGGGTGGTAGCTGAAGACGTGGTGTTTAAACCTGTGGCAGCCCCTTGGAGTCCGGAGCACCAACTGCAGCGCCCACAGCTGACTCGGCAGGTCCTGGGAAGGGAGGACCTGACAGCTTTTTTCTTGGGGAACCCCCTTCCCCGCTACCTTTACTTGGCTAGCAACCAGACTAATTCCTGGGGTCACCAGCGCGGGTACCGAATCCAGATCCACAGCCCTCTTGGCATACACATGCCCCTGGACAGCGACATGGAGAGGGCCCTCAGCTGGGGGAGATACCAGCTTGTGGTGACCCGGAGGAAGGAGGAGGAGTCACAGAGCAGCAGCATCTATTACCAGAATGACATCTGGACACCCACTACGGCCTTTGCTGACTTCATCAACAATGAGACCCTCTTAGGAGAGGACCTGGTGGCTTGGGTTACAGCCAGCTTCCTGCACATCCCCCACGCTGAGGATGTCCCCAACACAGTGACTCTGGGGAACAGAGTTGGCTTCTTGCTCCGACCCTATAACTTCTTTGATGAGGACCCCTCCATCTTCTCCCCTGGCAGCGTCTACTTTGAGAAGGGCCAGGATGCTGGGCTCTGCAGTGTCAATCATGTGGCCTGCATCCCCCACCTGGCGGCCTGTGTGCCGGACCTGCCCCCTTTCTCTTACCAAGACTTTCTCCATTGCGTCGGAATACTGAGAACCTCAGCCAGAGTCTAG

Related Sequences

bmy_15643T0 Protein

Length: 770 aa      View alignments
>bmy_15643T0
MNLKVVLVFLALSLITVFALAYVLLTSQGSSSQPPRCPSVSYSAQPWTHRGQSRLFADLSREELTAVMSFLTQKLGPGLVDAAQAHPFDNCVFSVELQLPPKAAALACLDRGSPPPAREALAIVFFGGQPQPNVTELVVGPLPHPSYLRDVTVERHGGPLPYHRRPVLGTESAQMWKHLKEVELPKAPVFLASVFNYSGSTLAALHATPRGLRSGDRATWIALYHNISGVGIFLHPVGLELLLDHRALDPARWAVQQVFYLGHYYADLGQLEWEFKAGRLEVVRVPLPLPVGASSLRSRVSPGPLPPLQFSPQGSRYSVQGNLVASSLWTFTFGHGVFSGMRIFDVRFKGERVAYEVSVQECVSIYGADSPKTMMTRYLDSSYGLGHHSRGLVRGVDCPYQSTMVDIHVLVGKGAVQLLPGAVCVFEEAQGLPLRRHHNHLQSHFYGGLAGSALVVRSVSSVGNYDYIWDFVLHPNGALEGRVHATGYINTAFLSGGEESLLFGNRVGEQVLGAVHTHAFHFKLDLDVAGLKNWVVAEDVVFKPVAAPWSPEHQLQRPQLTRQVLGREDLTAFFLGNPLPRYLYLASNQTNSWGHQRGYRIQIHSPLGIHMPLDSDMERALSWGRYQLVVTRRKEEESQSSSIYYQNDIWTPTTAFADFINNETLLGEDLVAWVTASFLHIPHAEDVPNTVTLGNRVGFLLRPYNFFDEDPSIFSPGSVYFEKGQDAGLCSVNHVACIPHLAACVPDLPPFSYQDFLHCVGILRTSARV*