Part of scaffold_1176 (Scaffold)

For more information consult the page for scaffold_1176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BECN1 ENSTTRG00000011716 (Bottlenosed dolphin)

Gene Details

beclin 1, autophagy related

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011116, Bottlenosed dolphin)

Protein Percentage 95.05%
cDNA percentage 94.67%
Ka/Ks Ratio 0.39282 (Ka = 0.0431, Ks = 0.1096)

BECN1 ENSBTAG00000019914 (Cow)

Gene Details

Beclin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026531, Cow)

Protein Percentage 94.14%
cDNA percentage 91.89%
Ka/Ks Ratio 0.19584 (Ka = 0.048, Ks = 0.245)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1338 bp    Location:49287..59094   Strand:+
>bmy_15644
ATGGAGGGGTCTAAGACATCCAGCAGCACCATGCAGGTGAGCTTCGTGTGTCAGCGCTGCAGCCAGCCCCTGAAACTGGACACGAGCTTCAAGATCCTGGACCGTGTCACCATCCAGGAGCTCACAGCTCCATTACTTGCCACAGCCCAGGTGAAACCAGGAGAGACCCAGGAGGAAGAGGCTAACTCAGGAGAGGAGCCATTTATTGAAACTCGCCAGGATGGTGTCTCTCGCAGATTCATCCCCCCAGCCAGTCCATCCAGGCCAACCTTCGTGCTGAGTGTCCCTGTGGAAGACCAGCATGGCCTTCCCTTGGGAGAGAGGTACCCTTGGGAGGTCACTGGGGACCTTTTCGACATCATGTCAGGCCAGACAGATGTGGATCACCCACTGTGTGAGGAATGCACAGATACTCTTTTAGACCAGCTGGACACTCAGCTCAACGTCACTGAAAATGAGTGTCAGAACTACAAACGCTGCTTGGAAATCTTAGAGCAAATGAATGAAGATGACAGCGAACAGCTCCAGATGGAGCTAAAGGAGCTGGCATTAGAGGAGGAGAGGCTGATCCAAGAGCTGGAAGATGTGGAAAAGAACCGTCAGATAGTGGCAGAAAATCTTGAGAAGGTCCAGGCTGAGGCTGAGAGGTTGGATCAGGAGGAAGCTCAGTATCAAAGGGAATATAGTGAATTTAAACGACAACAGCTAGAACTGGATGATGAGCTGAAGAGTGTAGAAAACCAGATGCGTTACGCCCAGATGCAGCTGGACAAGCTGAAGAAAACCAACGTCTTTAACGCAACCTTCCACATTTGGCACAGTGGACAGTTTGGCACAATCAATAACTTCAGACTGGGTCGCCTGCCCAGTGTCCCCGTGGAATGGAATGAGATCAACGCTGCTTGGGGCCAGACAGTGTTGCTGCTTCATGCCCTGGCCAATAAGATGGGCCTGAAATTTCAGAGGTATCGACTTGTTCCCTATGGAAACCATTCGTATCTGGAGTCTCTGACAGACAAATCTAAGGAGCTGCCGCTGTACTGTTCTGGGGGGCTGCGGTTTTTCTGGGACAACAAGTTTGACCACGCAATGGTGGCTTTCCTGGACTGTGTGCAGCAGTTCAAAGAAGAGGTTGAGAAAGGCGAGACACGTTTTTGTCTTCCTTACAGGATGGATGTGGAGAAAGGCAAGATTGAAGACACAGGAGGCAGCGGTGGCTCCTATTCCATCAAAACCCAGTTTAACTCTGAGGAACAGTGGACAAAAGCTCTCAAGTTCATGCTGACGAATCTTAAGTGGGGTCTTGCTTGGGTATCCTCACAGTTTTATAACAAATGA

Related Sequences

bmy_15644T0 Protein

Length: 446 aa      View alignments
>bmy_15644T0
MEGSKTSSSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLATAQVKPGETQEEEANSGEEPFIETRQDGVSRRFIPPASPSRPTFVLSVPVEDQHGLPLGERYPWEVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNEDDSEQLQMELKELALEEERLIQELEDVEKNRQIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK*