Sequence details bmy_15648 (Coding sequence)

Part of scaffold_1176 (Scaffold)

For more information consult the page for scaffold_1176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS25 ENSTTRG00000011699 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 25 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011096, Bottlenosed dolphin)

Protein Percentage 99.36%
cDNA percentage 98.72%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0363)

VPS25 ENSBTAG00000019906 (Cow)

Gene Details

Vacuolar protein-sorting-associated protein 25

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026518, Cow)

Protein Percentage 98.73%
cDNA percentage 96.41%
Ka/Ks Ratio 0.03165 (Ka = 0.0055, Ks = 0.1748)

Additional orthologs identified in other species via the OPTIC pipeline.

VPS25 (Human)   Vps25 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 477 bp    Location:91303..86389   Strand:-
Raw sequence 
>bmy_15648
ATGGCGATGAGTTTCGAGTGGCCGTGGCAGTATCGCTTCCCGCCCTTCTTTACGTTGCAGCCGAACGTGGACACTCGGCAGAAGCAGCTGGCCGCCTGGTGCTCGCTAGTCCTGTCCTTCTGTCGCCTGCACAAACAGTCCAGCATGACGGTGATGGAAGCTCAGGAGAGCCCGCTCTTCAACAACGTGAAGCTACAGCGGAACCTCGAGTGGTTGGATAAGAACAAGTCTAGCTTCCTGATCATGTGGCGGAGGCCAGAAGAATGGGGGAAGCTCATCTATCAGTGGGTTTCCAGGAGTGGCCAGAACAACTCCGTGTTCACCTTATACGAACTGACCAATGGGGAAGACACAGAGGATGAGGAGTTCCACGGGCTGGATGAGGCAACCCTACTGCGGGCTCTGCAGGCCCTACAGCAGGAGCACAAGGCCGAGATCATCACTGTCAGCGATGGCCGAGGCGTCAAGTTCTTCTAG

Related Sequences

bmy_15648T0 Protein

Length: 159 aa      View alignments
>bmy_15648T0
MAMSFEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKLQRNLEWLDKNKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF*