Sequence detailsbmy_15662 (Coding sequence)

Part of scaffold_1176 (SequenceType object (1))

For more information consult the page for scaffold_1176 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.68276ENSBTAG00000019218 (Cow)

Gene Details

V-type proton ATPase 116 kDa subunit a isoform 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000043461, Cow)

Protein Percentage 93.66%
cDNA percentage 91.55%
Ka/Ks Ratio 0.16558 (Ka = 0.0437, Ks = 0.264)

Additional orthologs identified in other species via the OPTIC pipeline.

ATP6V0A1 (Human)   Atp6v0a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1470 bp    Location:307502..278629   Strand:-
Raw sequence 
>bmy_15662
ATGGAAGGTCATTGCTCTTTAGTGAGCCAGATAAAAGCCGGTGACCTACATTGTTCTGCTGTGGATTTCGTGGTTCTGAATCAAACGGAGGATCACCGCCAGAGGGTTCTGCAGGCAGCTGCTAAGAACATCCGTGTCTGGTTCATCAAAGTGCGGAAGATGAAGGCCATCTACCACACTTTGAACCTGTGCAACATAGATGTGACCCAGAAGTGCCTGATTGCGGAGGTCTGGTGCCCTGTCACTGACCTTGACTCCATCCAGTTTGCGCTCAGAAGGGGCACGATGTTTAGCACTGTGTTCAGCGGACGGTACATTATTCTGCTGATGGGAGTGTTCTCCATCTACACTGGCCTCATCTACAATGATTGCTTTTCCAAGTCTCTTAATATCTTCGGGTCATCCTGGAGTGTGCGGCCAATGTTTACTTTATACAATTGGACGGAAGAGACGGTTCGGGGGAACCCTGTCCTCCAGCTGAACCCAGCTGTCCATGGAGTTTTCGGTGGACCATATCCTTTTGGCATCGATCCAATTTGGAACATTGCTACCAATAAACTGACCTTCCTCAACTCCTTTAAGATGAAGATGTCTGTTATCCTTGGTATCATCCACATGATGTTTGGAGTCAGCCTGAGCCTTTTCAACCATACCTATTTCAAGAAGCCCCTGAATATCTACTTTGGATTTATTCCGGAAATAATCTTCATGACCTCYTTGTTTGGCTACTTGGTCATCCTTATTTTTTACAAGTGGACAGCCTATGATGCTCACACATCTGAGAAAGCGCCAAGCCTTCTGATCCATTTCATAAACATGTTCCTCTTTTCCTACGGGGACTCTGGTAATTCGATGCTGTATTCTGGACAGAAAGGAATTCAGTGTTTCCTGGTAGTGGTTGCACTGCTGTGTGTCCCTTGGATGCTGCTGTTGAAACCRCTGGTCCTTCGCCATCAATATTTGAGGAGGAAGCATTTGGGAACTCTCAACTTTGGTGGGATCAGGGTGGGCAACGGACCGACAGAGGAGGATGCTGAGATTATTCAGCATGACCAGCTCTCCACCCATTCAGAGGACGCAGAGGAGTTTGATTTTGGGGACACCATGGTCCACCAGGCCATCCACACCATTGAGTACTGCCTGGGCTGCATCTCCAACACCGCCTCCTACCTGCGGCTCTGGGCCCTCAGCCTCGCTCATGCACAGCTGTCGGAGGTGCTTTGGACCATGGTGATCCACATCGGCCTAAGCGTGAAGAGCTTGGCGGGAGGTTTGGCGCTGTTCTTCATCTTTGCCGCCTTCGCCACCCTGACTGTGGCCATCCTCCTGATCATGGAGGGCCTCTCAGCCTTCCTCCACGCGCTGCGGTTACACTGGGTGGAATTCCAGAATAAATTCTACAGCGGGACGGGTTTCAAGTTCCTACCCTTCTCCTTCGAGCACATCCGAGAAGGGAAGTTTGACGAATGA

Related Sequences

bmy_15662T0 SequenceType object (3)

Length: 490 aa      
>bmy_15662T0
MEGHCSLVSQIKAGDLHCSAVDFVVLNQTEDHRQRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCPVTDLDSIQFALRRGTMFSTVFSGRYIILLMGVFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFTLYNWTEETVRGNPVLQLNPAVHGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMMFGVSLSLFNHTYFKKPLNIYFGFIPEIIFMTSLFGYLVILIFYKWTAYDAHTSEKAPSLLIHFINMFLFSYGDSGNSMLYSGQKGIQCFLVVVALLCVPWMLLLKPLVLRHQYLRRKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDAEEFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLSVKSLAGGLALFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIREGKFDE*