Part of scaffold_1173 (Scaffold)

For more information consult the page for scaffold_1173 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TIMP1 ENSTTRG00000009994 (Bottlenosed dolphin)

Gene Details

TIMP metallopeptidase inhibitor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009476, Bottlenosed dolphin)

Protein Percentage 86.22%
cDNA percentage 87.41%
Ka/Ks Ratio 0.30494 (Ka = 0.0181, Ks = 0.0594)

TIMP1 ENSBTAG00000005043 (Cow)

Gene Details

Metalloproteinase inhibitor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006653, Cow)

Protein Percentage 92.75%
cDNA percentage 93.08%
Ka/Ks Ratio 0.13977 (Ka = 0.0342, Ks = 0.2445)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 885 bp    Location:234141..237963   Strand:+
>bmy_15680
ATGGGGGAGGGGGGTGGTCAGGGCGAGGCTCAGGGGGAGGGAGAGGAGGAGGGTGCATCTCCTTTTCGGCAGCCCAGGGCCCGCCCCTTGGCCTCCGCGGATGGTGGGCGGATGAGTAATGCATCCAGGAAGCCTGGAGGCCTGTGGTTTCCTACCAGCTGCCACCCCGCCCCTCGCTTGGATATTTATCCTCCGCTGCTCCAGCCCTGCCGCCATCGCCGAAGACCCAGCGCCCAGAGAGGCTACACCAGAGAACGCACCATGGCCCCCTTTGCACCCCTGGCCTCTGGCATCCTGTTGCTGCTGTGGCTGACAGCCCCCAGCCGAGCCTGTACCTGCGTCCCACCCCACCCACAGACGGCCTTCTGCAGCTCCGACCTCGTCATCAGGGCCAAATTTGTGGGGACTGCAGAAGTCAACCGGACCTCCTTATACCAGCGTTACGAGATCAAGATGACCAAGATGTTCAAAGGGTTCAATGCCTTGGGGGATGCCTCTGACATCCGGTTCATCTACACCGCCGCCATGGAGAGCGTCTGCGGATACTTCCACAGGTCCCAGAACCGCAGTGAGGAGTTTCTCATAGCTGGACAACTGTCGAACGGGAACCTGTACATCACCACCTGCAGTTTCGTGGCTCCTTGGAACAGTCTGAGCTCCGCTCAGCGCCGGGGCTTCACCAAGACCTATGCTGCTGGCTGTGAGGAATGCACAGTGTTTCCCTGTTCATCCATCCCCTGCAAACTGCAGAGTGACACTCATTGCTTGTGGACGGACCAGCTCCTCACGGGCTCTGACAAGGGCTTCCAGAGCCGCCACCTTGCCTGCCTGCCCCGGGAGCCAGGGATGTGCACCTGGCAGTCCTTGCGGCCCCGGATGGCCTGA

Related Sequences

bmy_15680T0 Protein

Length: 295 aa      View alignments
>bmy_15680T0
MGEGGGQGEAQGEGEEEGASPFRQPRARPLASADGGRMSNASRKPGGLWFPTSCHPAPRLDIYPPLLQPCRHRRRPSAQRGYTRERTMAPFAPLASGILLLLWLTAPSRACTCVPPHPQTAFCSSDLVIRAKFVGTAEVNRTSLYQRYEIKMTKMFKGFNALGDASDIRFIYTAAMESVCGYFHRSQNRSEEFLIAGQLSNGNLYITTCSFVAPWNSLSSAQRRGFTKTYAAGCEECTVFPCSSIPCKLQSDTHCLWTDQLLTGSDKGFQSRHLACLPREPGMCTWQSLRPRMA*