Sequence details bmy_15682 (Coding sequence)

Part of scaffold_1173 (Scaffold)

For more information consult the page for scaffold_1173 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CFP ENSTTRG00000010000 (Bottlenosed dolphin)

Gene Details

complement factor properdin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009486, Bottlenosed dolphin)

Protein Percentage 91.8%
cDNA percentage 93.83%
Ka/Ks Ratio 0.56013 (Ka = 0.0559, Ks = 0.0998)

CFP ENSBTAG00000015815 (Cow)

Gene Details

properdin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021009, Cow)

Protein Percentage 83.29%
cDNA percentage 88.86%
Ka/Ks Ratio 0.46592 (Ka = 0.0985, Ks = 0.2115)

CFP  (Minke Whale)

Gene Details

complement factor properdin

External Links

Gene match (Identifier: BACU008463, Minke Whale)

Protein Percentage 78.19%
cDNA percentage 81.96%
Ka/Ks Ratio 0.38484 (Ka = 0.1674, Ks = 0.435)

Additional orthologs identified in other species via the OPTIC pipeline.

CFP (Human)   Cfp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1218 bp    Location:278353..274221   Strand:-
Raw sequence 
>bmy_15682
ATGCCGACCCGAGCGCAGGCCCACCGGTTACTGCTGCTACCGCTGCCGCTGCTGCTGCTCACCCTGTCAGCCACAGGCTCAGACCCTGTACTCTGCTTCACCCAGTATGAGGAATCCACGGGCAAGTGCAAGGGCCTCCTTGGGGGAGGTGTCAGCACGGAAGACTGCTGTCTCAATGCTGACTACGCCTTCCAGGAGCCCGGCAGCAAGCTCTGTATGGCGTGCAGATGCATTGCAGAGGTTGTGGGTAGCCAGAGGATTTCTGAGGAGATGGGTGGTTGGTCCAACTGGGGGCCCTGGGCATCTTGCTCTGTCACCTGCTCTAAAGGGACCCGGATTCGTCGTCGAGCATGTGATCGCCCCACCCCCAAGTGTGGGGGCCACTGCCCAGGACAGGCACAGGAGTCAGAGGCCTGTGACACCAAACAGGTCTGCCCCACACACGGGGCCTGGGCTGCTTGGGGCCCCTGGGGCCCCTGCTCAGGCACCTGCCACGGTGGACCCAAGGCACCTGAGGAGAGACGAAGCCGCACATGCTCTGCACCTGAGCCCTCCACGCAGCCTCCTGGGAATCCCTGCCCAGGGTCATCCTCTGAGCAGCGGGCCTGCACCGGCCTGCCACCCTGCCCAGTGGCTGGTGGCTGGGGGCCATGGGGCGCTGTGAGCCCCTGCCCTGTGACCTGCGGCCTGGGTCAGACTCGGGAACAACGGACATGTGATCGCCCTGTGCCCCAGCACGGGGGCCCCTTCTGTGTCGGTGATGCCACCCGGACCCACATCTGCAACACGGCCGTGCACTGCCCCGTGAACGGAGAGTGGGAGCTCTGGGGGGAGTGGAGCACCTGCATCCGCCGGAGCATAAAACACATCAGCTGCCAGGAGATCCCAGGCCAGCAGACCCGCTCCAGGCTCTGCAAGGGCCGCAAGTTTGACGGACAGCGATGTAGCGGGGAACAACAGGATATCCGGCACTGCTACAACATCCAGCGCTGCCTCTACCGCATGTCCCTGCAGCCTCTCTCTCACCACCCCACCAAGACCTCTAATTCTGACTCGGGAACCCCTCCCCTCATGGCAGGGAAAGGCTCCTGGTCGGAGTGGAGTACCTGGGGGCTGTGCATGCCCCCGTGTGGACCCAACCCCATCCGCACCCGCCAGCGCCTCTGCAAGGCCACGCTCCCCAAATTCTCTTACCCAAGCTTTGACTTGCTCGTTTAG

Related Sequences

bmy_15682T0 Protein

Length: 406 aa      View alignments
>bmy_15682T0
MPTRAQAHRLLLLPLPLLLLTLSATGSDPVLCFTQYEESTGKCKGLLGGGVSTEDCCLNADYAFQEPGSKLCMACRCIAEVVGSQRISEEMGGWSNWGPWASCSVTCSKGTRIRRRACDRPTPKCGGHCPGQAQESEACDTKQVCPTHGAWAAWGPWGPCSGTCHGGPKAPEERRSRTCSAPEPSTQPPGNPCPGSSSEQRACTGLPPCPVAGGWGPWGAVSPCPVTCGLGQTREQRTCDRPVPQHGGPFCVGDATRTHICNTAVHCPVNGEWELWGEWSTCIRRSIKHISCQEIPGQQTRSRLCKGRKFDGQRCSGEQQDIRHCYNIQRCLYRMSLQPLSHHPTKTSNSDSGTPPLMAGKGSWSEWSTWGLCMPPCGPNPIRTRQRLCKATLPKFSYPSFDLLV*