Sequence detailsbmy_15682 (Coding sequence)

Part of scaffold_1173 (SequenceType object (1))

For more information consult the page for scaffold_1173 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CFPENSTTRG00000010000 (Bottlenosed dolphin)

Gene Details

complement factor properdin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009486, Bottlenosed dolphin)

Protein Percentage 91.8%
cDNA percentage 93.83%
Ka/Ks Ratio 0.56013 (Ka = 0.0559, Ks = 0.0998)

CFPENSBTAG00000015815 (Cow)

Gene Details

properdin precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021009, Cow)

Protein Percentage 83.29%
cDNA percentage 88.86%
Ka/Ks Ratio 0.46592 (Ka = 0.0985, Ks = 0.2115)

CFP (Minke Whale)

Gene Details

complement factor properdin

External Links

Gene match (Identifier: BACU008463, Minke Whale)

Protein Percentage 78.19%
cDNA percentage 81.96%
Ka/Ks Ratio 0.38484 (Ka = 0.1674, Ks = 0.435)

Additional orthologs identified in other species via the OPTIC pipeline.

CFP (Human)   Cfp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1218 bp    Location:278353..274221   Strand:-
Raw sequence 
>bmy_15682
ATGCCGACCCGAGCGCAGGCCCACCGGTTACTGCTGCTACCGCTGCCGCTGCTGCTGCTCACCCTGTCAGCCACAGGCTCAGACCCTGTACTCTGCTTCACCCAGTATGAGGAATCCACGGGCAAGTGCAAGGGCCTCCTTGGGGGAGGTGTCAGCACGGAAGACTGCTGTCTCAATGCTGACTACGCCTTCCAGGAGCCCGGCAGCAAGCTCTGTATGGCGTGCAGATGCATTGCAGAGGTTGTGGGTAGCCAGAGGATTTCTGAGGAGATGGGTGGTTGGTCCAACTGGGGGCCCTGGGCATCTTGCTCTGTCACCTGCTCTAAAGGGACCCGGATTCGTCGTCGAGCATGTGATCGCCCCACCCCCAAGTGTGGGGGCCACTGCCCAGGACAGGCACAGGAGTCAGAGGCCTGTGACACCAAACAGGTCTGCCCCACACACGGGGCCTGGGCTGCTTGGGGCCCCTGGGGCCCCTGCTCAGGCACCTGCCACGGTGGACCCAAGGCACCTGAGGAGAGACGAAGCCGCACATGCTCTGCACCTGAGCCCTCCACGCAGCCTCCTGGGAATCCCTGCCCAGGGTCATCCTCTGAGCAGCGGGCCTGCACCGGCCTGCCACCCTGCCCAGTGGCTGGTGGCTGGGGGCCATGGGGCGCTGTGAGCCCCTGCCCTGTGACCTGCGGCCTGGGTCAGACTCGGGAACAACGGACATGTGATCGCCCTGTGCCCCAGCACGGGGGCCCCTTCTGTGTCGGTGATGCCACCCGGACCCACATCTGCAACACGGCCGTGCACTGCCCCGTGAACGGAGAGTGGGAGCTCTGGGGGGAGTGGAGCACCTGCATCCGCCGGAGCATAAAACACATCAGCTGCCAGGAGATCCCAGGCCAGCAGACCCGCTCCAGGCTCTGCAAGGGCCGCAAGTTTGACGGACAGCGATGTAGCGGGGAACAACAGGATATCCGGCACTGCTACAACATCCAGCGCTGCCTCTACCGCATGTCCCTGCAGCCTCTCTCTCACCACCCCACCAAGACCTCTAATTCTGACTCGGGAACCCCTCCCCTCATGGCAGGGAAAGGCTCCTGGTCGGAGTGGAGTACCTGGGGGCTGTGCATGCCCCCGTGTGGACCCAACCCCATCCGCACCCGCCAGCGCCTCTGCAAGGCCACGCTCCCCAAATTCTCTTACCCAAGCTTTGACTTGCTCGTTTAG

Related Sequences

bmy_15682T0 SequenceType object (3)

Length: 406 aa      View alignments
>bmy_15682T0
MPTRAQAHRLLLLPLPLLLLTLSATGSDPVLCFTQYEESTGKCKGLLGGGVSTEDCCLNADYAFQEPGSKLCMACRCIAEVVGSQRISEEMGGWSNWGPWASCSVTCSKGTRIRRRACDRPTPKCGGHCPGQAQESEACDTKQVCPTHGAWAAWGPWGPCSGTCHGGPKAPEERRSRTCSAPEPSTQPPGNPCPGSSSEQRACTGLPPCPVAGGWGPWGAVSPCPVTCGLGQTREQRTCDRPVPQHGGPFCVGDATRTHICNTAVHCPVNGEWELWGEWSTCIRRSIKHISCQEIPGQQTRSRLCKGRKFDGQRCSGEQQDIRHCYNIQRCLYRMSLQPLSHHPTKTSNSDSGTPPLMAGKGSWSEWSTWGLCMPPCGPNPIRTRQRLCKATLPKFSYPSFDLLV*