Part of scaffold_1175 (Scaffold)

For more information consult the page for scaffold_1175 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RLBP1 ENSTTRG00000008805 (Bottlenosed dolphin)

Gene Details

retinaldehyde binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008347, Bottlenosed dolphin)

Protein Percentage 99.05%
cDNA percentage 98.63%
Ka/Ks Ratio 0.08708 (Ka = 0.0041, Ks = 0.047)

RLBP1 ENSBTAG00000033721 (Cow)

Gene Details

Retinaldehyde-binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045055, Cow)

Protein Percentage 95.9%
cDNA percentage 94.64%
Ka/Ks Ratio 0.0913 (Ka = 0.0195, Ks = 0.2134)

RLBP1  (Minke Whale)

Gene Details

retinaldehyde binding protein 1

External Links

Gene match (Identifier: BACU016093, Minke Whale)

Protein Percentage 99.38%
cDNA percentage 99.07%
Ka/Ks Ratio 0.08329 (Ka = 0.0025, Ks = 0.0305)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 975 bp    Location:152561..145273   Strand:-
>bmy_15704
ATGTCAGAGGGGGCGGGCACATTCCGCATGGTCCCTGAAGAGGAACAGGAGCTCCGTGCCCAACTGGAGCGGCTTACAACCAAAGACCATGGACCTGTCTTTGGCCAGTGCAGCCACCTGCCCCGCCACACCTTGCAGAAGGCCAAGGACGAGCTGAATGAGAGGGAGGAGACCCGGGAGGAGGCGGTGCGGGAGCTGCAGGAGCTGGTGCAGGGGGAGGCAGCCTCGGGGCAGGAGCTGGCCGTGGCCGTGGCGGAGAGGGTGCAGGGAAAGGACAGCGCCTTCTTCCTGCGCTTCATCCGCGCACGCAAATTCCACGTGGGCCGAGCCTACGAGCTGCTCAGAGGCTATGTGAACTTCCGGCTGCAGTACCCAGAGCTGTTCGACAGCCTGTCCCTGGAGGCTGTCCGCTGCACTGTCGAGGCTGGCTACCCTGGTGTCCTCTCCAGTCGGGACAAGTATGGCCGAGTGGTCATGCTCTTCAATATTGAGAACTGGGACTCTGAAGAAATCACCTTTGATGAGCCYGTTCACTTTGTGCCCAAGATCTTGCAGGCATACTGTTTCATCCTGGAGAAGCTACTGGAGAATGAGGAAACTCAAATTAATGGCTTTTGCATCATTGAGAACTTCAAGGGCTTTACCATGCAGCAGGCTGCCGGACTTCGGGCTTCAGATCTCAGGAAGATGGTGGACATGCTCCAGGATTCCTTCCCAGCCCGGTTCAAAGCCATCCACTTCATCCACCAGCCGTGGTACTTCACCACAACCTACAACGTGGTCAAGCCCTTCTTGAAGAGCAAATTGCTCCAGAGGGTCTTTGTCCATGGAGAAGACCTCTCCAGCTTCTACCAGGAGTTCAACGAGGACATCCTGCCCTCCGACTTYGGGGGCACACTGCCCAAGTATGACGGCAAAGTCGTTGCTGAACAGCTCTTTGGTCCCCGGGCCCAAGATGAGAACACAGCCTTCTGA

Related Sequences

bmy_15704T0 Protein

Length: 325 aa      View alignments
>bmy_15704T0
MSEGAGTFRMVPEEEQELRAQLERLTTKDHGPVFGQCSHLPRHTLQKAKDELNEREETREEAVRELQELVQGEAASGQELAVAVAERVQGKDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPELFDSLSLEAVRCTVEAGYPGVLSSRDKYGRVVMLFNIENWDSEEITFDEPVHFVPKILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAGLRASDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLQRVFVHGEDLSSFYQEFNEDILPSDFGGTLPKYDGKVVAEQLFGPRAQDENTAF*