Part of scaffold_1175 (Scaffold)

For more information consult the page for scaffold_1175 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TICRR ENSTTRG00000015481 (Bottlenosed dolphin)

Gene Details

TOPBP1-interacting checkpoint and replication regulator

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014687, Bottlenosed dolphin)

Protein Percentage 94.4%
cDNA percentage 96.45%
Ka/Ks Ratio 0.63027 (Ka = 0.0308, Ks = 0.0488)

C15ORF42 ENSBTAG00000002418 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003143, Cow)

Protein Percentage 83.85%
cDNA percentage 88.56%
Ka/Ks Ratio 0.43484 (Ka = 0.0934, Ks = 0.2148)

TICRR  (Minke Whale)

Gene Details

TOPBP1-interacting checkpoint and replication regulator

External Links

Gene match (Identifier: BACU016087, Minke Whale)

Protein Percentage 96.91%
cDNA percentage 97.9%
Ka/Ks Ratio 0.59646 (Ka = 0.0178, Ks = 0.0298)

Genome Location

Sequence Coding sequence

Length: 5598 bp    Location:471504..513929   Strand:+
>bmy_15711
ATGGCCTGCTGTCACAACGTAATGCTGCTGCTGGATACCGCAGGAGGCGCCGCTGGTGAGAGCCCGGTCCGGCGGGTCGCCCTGCGCCTCCTCACCTACCTGAGTTGCCGGTTCGGCCTGGCCAGGGTCCGCTGGGCCTTCAGGTTCTTTGACTCTCAGGGTGCGCGGAGCCGGCCTTCCCGCGTGTCTGACTTCCGCGAGCTGGGGGTCCGCTCCTGGGAGGACTTTGAGGAGGAGCTGGAGGCCAGGCTCGGGGATGGCGCCCACGGCGCCCACCTGCCGGGCCCGGCGCCCAGGGCCACCCACACGCACAGTGCCCTTATGGAGACGCTGCTAGACTATCAGTGGGACCGGCCCGAGATCACATCGCCCACGAAGCCGATTCTGCGTAGCAGCGGGAGGAGACTGCTGGTCGTGGAGGGCGAGGCCAAGGAGGCCGAGTCTGCGCTCGGCGGCTTTGTGAACGCCGTCTTCCTCCTAGCCCCCTGTCCGCATTCGCAGAGGGAGCTGCTGCAGTTCGTGTCCGGGTGCGAGGCCCAGGCCCAGCGCCTGCCGCCTACTCCTAAGCAGGTCATGGACAAGTTGCTGCCCAAGAGAGTCCAGGAAGTCATGATAACCCGAAAAATCACCTTGTACTGGGTGGATACCACCGAGTGGCCTAAGTTGTGGGAATCTCCGGACCACCTTGGGTACTGGACAGTATGTGAACTGCTCCACCATGTAGGAGGCACTGTCTTGCCATTTGAAACTTTCAGCCAGGATTTTACTAAAGCTGGGGAAACACTGCTTGGTAGTGAAAGAAAGCTGTCAAGGGAACCTCACCTCTCTTCATGGATTTCAACTCTGCCGACTGATTCCACTTTAAACTGTTTGCTCTATAATTCTCCTGAGTATGAAGCCTCATTTCCACGGGTGGAAGGAACATTATTTTTCCCTGTTGAAGGCAAAGAGATTCAAGAAACATGGACAGTTACTCTAGAGCCCTTGGCCATGCATCAGAGATATTTTCAGAAACCAGTCAGAATTTTTCTAAAAGGCACAGTGACCCAGTGGTCCCTCCCAGCAAGCTGCACTTTGGGCACTGATAGTTGGATGCTACAAAGTCCAGAGGGTAACAAATCAACTCAAAGGATGTTATTTCAGCAGCTGGCAAACAGGCTGACTGCTGAAGAGTTACATCTGGTTACCAGTGTGGACCCTGGTGAAGGCTGGCCCCCCATCACTGGAGTTATTTCCCCCTTCTCTGCCAGTGCTACAATTCTCACTGTGTTCCACACCAAGGAGACTGAATTTCAAAGACATTTTCTCCAAACAGTTGTGGCAGAGAGCCCCCAGGATTTAGCTTCCCTTTTTTCTGAGGTTGTGGATGGTGTATTGAATCAGATTCACAATTCACTTGAAGATCCTGCTACCTCAGCTCCGCCTACTCCAGAATGGGCCCAGCAGGAGCTTGGCCGCACAGCTCCCTGGAATTCCGCTGTTGTGGAGAAGTGGTTTCCTTGCTCTAACTTTAGTGGTGCCAGTTCAAATTTGATGGAGTCATTTTGGTTACTACAGGCTGCCTCATCTAATAAGGAAGAGCCTTCCAAAACTGAAAGTGAATTGACACGTTGCCTCTCTGAGCTCTACCAGAGAAAGTCTCGTGAAGAATACACTGTGTCCAATCAGGAAGACAGCAAAAAGAAGCGAGGTGTCCCTCGTACTCCAGTGAGGCAGAAGATGAATACCATGTGCCGTTCCTTGAAGATGCTGAATGTTGCAAGACTGAATGTAAAGGCTCAGAAGTTACATCCAGATGGCAGTCCAGACACAGCTGGGGAGAAAGGGATCCAAAAGATAGCCAATGGAAGAACAGCAGATAAATTGGAAAACAAAGGAAGGACACTGAGAAGTTCTAAACCTAAAGGAGAAAGCGTGTTGTATTCATGTGCTCGGAACATGATCTCAAACATTAAAGCATTCCTAAAGTCCAAAGGCACCAAGGAATTAGAAATGAACTGCCTACATCAAGTAAGAAACAACCTCTTGAAAACTAGCAAAAGTCTTCGACAGAATCTCCAGGTATTTCTTCATTTGGAGATGTGTCGGCAGTGCCCTTCAGTATATGAACATATAGATGAAATGGAGCAAGTAGTGGAGGAGGCAAGTATACTGCTTAGTGCCACTGGGGATGTGACAGATATGCTGCGCATGGTGTATTTAACTGAAGATTCGGCATACCTAGCAAAGTTTCTGGAAGAAATTTTGGAATTGTATATTGATTCAATCCCAAAGATACTTGGAAATCTTTACGACAGCCTAGGATTTCTGATTCCTCAGAAGCTGGCTGGTGTCCTTCCTACAGATTTTTTCGGTGATGACTCCATGACGCAGGAGAGCAAATCACCCCTTTCTGTGCCTCTTATGTCAAATGCTCATAGGTCAGTGTCGGGTGGCACTGAATCTGACCAGCTGGAGGAGCTTCGTACCAGATCAGCTAAGAAGAGAAGGAAAAATGCAATAAGACATAAAAGCATTGCAGAGGTTTCACAAAATCTGCGACAAATTGAAATTCCCAAGGTATCCAAGAGAGCTACGAAAAATGAGAATTCTCACCCTACTCTTCAGCAGCCTCCACTCCCAGTGAAAGACACGGTACAAGAAGTGACCAAAGTTCGAAGAAATCTCTTCAACCAGAAAATGATTTCTCCTTCAAAGAGATCTGTAAAGCGGGGGTTGCCTAGAAGCCATTCTGTGTCAGCTGTGGAAGGTCTAGAGTATAAACTTGACAACTTCAAGAGGACCAAAGGTTATCGCAAGCTGCTAACCAAGAGTGTGGCCGAGACTCCAGTACATAAGCAAATCTCCAGAAGGCTGCTTCATAGACAGATCAAGGGCAGGTCCTCTGATCCTGGTCCTGAAATTGACGTTGTTGAAGAGTCCCCGGAAAAAGGAGAAGATGTTCTTGTAGAAGTAAGTTTGAGACGAAGTCCTCGAATCAAGCAGTTGGCATTCAGCAGGAAAAATTCTGGTTCCTTCTACTCTGTGTCTCAGCCAAAGTCTCGAAGTATACAAAGAGTTCACTCATTCCAGCAAGTCAAGTCAGACCAAAGAGAAAATTCTCCAATCCAAAGTATTCGGTCTCCCAAGAGGCTTCTTTTCGGGGCAGTGTCTGAGATGATCAGTCCCTCCGAGAAGGGTTCAGCTCGAATTAAAAGGCCTTCAGGAAACACACTGGGTTCTGAAATACCTATAGCTTATCAGACTCCTGAGAAGAGTTACTGGAAATCTCCAATCTCTTCTAAAGCTACACCAAGAAAGTTCCCTCATACACCACGAACTCCGTTGCGCACTCCTGAAAGGCTGCAAAAATCCCCGGCAGAAATGACCCCTGCCAAACAAGTCATTTTTAAGGAGTTCTTAAAAGACTCCTCACACGGCTGGCATTCACCATCTCGACCAAAAGCCACTCCTCAGAAAGGACACTCCCTGGCAGAAGGTCACTGTCCTCTTGAAAAAATACCGAGAACTCCCCAAAGACAAGGTGGTCAGCCACCTAGATTTTTGCAGAATTCTACTTGCCCACGTTTGGTGAATTCCAGTCCAGAAAGCACCTCCTGTCCGGCAGCCCTGGTTTCGTCAACTGCCCAGACCAGGAGTGAGTGTCTGACTCCCATCAGATACTCTCCTCGAATGCCTCTGAGGGCAGCAGCCTCGGGGGGCCGAAGACGAGCTGCCTTTGTGGGCACACCTCCAAGTCAGAAACGCCAGCTYCCCCATGGCTCCGGAGCGTCTCAGGCAGAGAAGCTGGCACAGCCRTGGAATGATGCTGTCGGAACCCCAGAGAAACCAGGGAACACAGCTCTGACTTCTCCAAAGAAACCTGTTACCTCTTCTTCACGTGGTATTTCCGAGAAGACTCCATTTGGGAATTTTTCTATAGAATCTCCTCCCTCTGGAGAACTGGATTGGCAAGAGGCCCAGAAATCACCCAGTGTAGCCACATCTCCCTCCTGTCCTGCTCCCTCGACTCCCCACAAAGCCTCACAGATAGCTAGATCTGACCTCCTACCCCCTCCACCCCCTTCTAAAATTGGGAAAAGGCATAAAAAGACCTCTAAAACAGAAAGAAACTTCCCGAAGAGCCAGCCTAACAGCTCTGCTGTTCTGAGGGTTGCCATAACTGACAGCCCAGCTGCCATCACAGATGCTAGAAAGAACCAGAAGGAAGCGACCCTCTCTCCTCCGTCTCCTCCTGAAAGACATAGTTACCCTGGGACTAGCTTTGGGAGTCACTGGCATACATCCTCTCCTTTGCTTATTGCAAGAGACTCGGAGTATCTCACTCTCCTGGATGAAGCTGCTGAGCACCATAGCGGCGATAACTTAAAAAGCAACGTTTCACCGGTGGAAGAAGATGAGGGGTCAAGGATGGGTACTTATGAGAAGCTGTCTCTGTGTAACCCCGGGATTCCTCCCTCTTCTCCTTCCTCTGGGCCCAGCTCTCCCCTGACACCCTGCTACGACCTGCACTGCACTGCAGACAGGAAGCAGCGCCAGGCTGCCGCACAACTAGAGAATCTGCAGGCGTCAGCCTGGCCCTCCAGAGCCTCTGCCAGCCCACAGACCTATGAGGTTGAGCTGGAGATGCAAGCTTCTGGCCTTCCCAAGCTTCGAATTAAAAAGATAGACCCCAGCTGTCTGTCAGAAGCCGAGCCCCTGCGAAGGGAGGAGAGCTCTCTGGGAGAGGAGAGCTGCCTCCCTGGTCTCAGCGTGCCCAGGGCCAACAAGTCCTCAGGCAAACCGGAAGCCACCTACCTGTCGCCCCCCTGCCTTCGCCCCTCGCACGGCACCCCTGGCAAGAGCGGGGGACAGACCTATATCTGCCAGTCCTGTACCCCCACCCGCTGCCCCTCTAGTACCCCCTCTCCATTTCAGACAGAAGTCGGGGTTCCTTGGACACCATCCCCCAAGCACAGCGGGAAGACAACTCCTGACACAATTAAAGACTGGCCCCGCCGGAAGAGGGCAGTGGACTGCAGCCTCAGCTCCTCTGCTGGGAGGAGCGAGGTCGGTACAGACCTTCCTGGGGGAGTGTTGCTGCTGGAGCCGGAGGGGAAGGAGCGAGGCCTTGAACTCAGCATTGTGAAGACCCCCGTCTTGGGGGATTTTGAGCTCGAGGGGGTGTGTCAGCTGCCAGACCAGTCACCTCCCAGGGACAGTGAGCCTAAGGCTGAGGGAGCCTTCTCCTGGGGACAGTTTGGGTTGGGATCTCGGAAGAGACTCCTTTCTGCCAAGGAGGAGGCTGAGTGTCAAACCAAAAGAGTCTGTGACAAGCAGACAGGAGACTCCCAAGTCGGTAAGAGTGAAGACAGGTCTCCAGGCCTGGGTGTGCGACAGCTCCCCTCCACGGCAGGCGACGAGGTGTTTGTTTCCGGTGCCACCCCGCCTCCCGGCTGTGCCGTGCGGAGCTGCCTCTCTGCCAGCGGTCTGCAGGCGTTGACCCACTCTCCGCTGCTGTTCCACGGGAAGGCACCCTCCTCTCAGTGTAAAGACACCAGAGCCGAGCATTCTCCAGGAGACGTCCCATCAGCAGAACTTACACACGGAAGAAGCTGA

Related Sequences

bmy_15711T0 Protein

Length: 1866 aa      View alignments
>bmy_15711T0
MACCHNVMLLLDTAGGAAGESPVRRVALRLLTYLSCRFGLARVRWAFRFFDSQGARSRPSRVSDFRELGVRSWEDFEEELEARLGDGAHGAHLPGPAPRATHTHSALMETLLDYQWDRPEITSPTKPILRSSGRRLLVVEGEAKEAESALGGFVNAVFLLAPCPHSQRELLQFVSGCEAQAQRLPPTPKQVMDKLLPKRVQEVMITRKITLYWVDTTEWPKLWESPDHLGYWTVCELLHHVGGTVLPFETFSQDFTKAGETLLGSERKLSREPHLSSWISTLPTDSTLNCLLYNSPEYEASFPRVEGTLFFPVEGKEIQETWTVTLEPLAMHQRYFQKPVRIFLKGTVTQWSLPASCTLGTDSWMLQSPEGNKSTQRMLFQQLANRLTAEELHLVTSVDPGEGWPPITGVISPFSASATILTVFHTKETEFQRHFLQTVVAESPQDLASLFSEVVDGVLNQIHNSLEDPATSAPPTPEWAQQELGRTAPWNSAVVEKWFPCSNFSGASSNLMESFWLLQAASSNKEEPSKTESELTRCLSELYQRKSREEYTVSNQEDSKKKRGVPRTPVRQKMNTMCRSLKMLNVARLNVKAQKLHPDGSPDTAGEKGIQKIANGRTADKLENKGRTLRSSKPKGESVLYSCARNMISNIKAFLKSKGTKELEMNCLHQVRNNLLKTSKSLRQNLQVFLHLEMCRQCPSVYEHIDEMEQVVEEASILLSATGDVTDMLRMVYLTEDSAYLAKFLEEILELYIDSIPKILGNLYDSLGFLIPQKLAGVLPTDFFGDDSMTQESKSPLSVPLMSNAHRSVSGGTESDQLEELRTRSAKKRRKNAIRHKSIAEVSQNLRQIEIPKVSKRATKNENSHPTLQQPPLPVKDTVQEVTKVRRNLFNQKMISPSKRSVKRGLPRSHSVSAVEGLEYKLDNFKRTKGYRKLLTKSVAETPVHKQISRRLLHRQIKGRSSDPGPEIDVVEESPEKGEDVLVEVSLRRSPRIKQLAFSRKNSGSFYSVSQPKSRSIQRVHSFQQVKSDQRENSPIQSIRSPKRLLFGAVSEMISPSEKGSARIKRPSGNTLGSEIPIAYQTPEKSYWKSPISSKATPRKFPHTPRTPLRTPERLQKSPAEMTPAKQVIFKEFLKDSSHGWHSPSRPKATPQKGHSLAEGHCPLEKIPRTPQRQGGQPPRFLQNSTCPRLVNSSPESTSCPAALVSSTAQTRSECLTPIRYSPRMPLRAAASGGRRRAAFVGTPPSQKRQLPHGSGASQAEKLAQPWNDAVGTPEKPGNTALTSPKKPVTSSSRGISEKTPFGNFSIESPPSGELDWQEAQKSPSVATSPSCPAPSTPHKASQIARSDLLPPPPPSKIGKRHKKTSKTERNFPKSQPNSSAVLRVAITDSPAAITDARKNQKEATLSPPSPPERHSYPGTSFGSHWHTSSPLLIARDSEYLTLLDEAAEHHSGDNLKSNVSPVEEDEGSRMGTYEKLSLCNPGIPPSSPSSGPSSPLTPCYDLHCTADRKQRQAAAQLENLQASAWPSRASASPQTYEVELEMQASGLPKLRIKKIDPSCLSEAEPLRREESSLGEESCLPGLSVPRANKSSGKPEATYLSPPCLRPSHGTPGKSGGQTYICQSCTPTRCPSSTPSPFQTEVGVPWTPSPKHSGKTTPDTIKDWPRRKRAVDCSLSSSAGRSEVGTDLPGGVLLLEPEGKERGLELSIVKTPVLGDFELEGVCQLPDQSPPRDSEPKAEGAFSWGQFGLGSRKRLLSAKEEAECQTKRVCDKQTGDSQVGKSEDRSPGLGVRQLPSTAGDEVFVSGATPPPGCAVRSCLSASGLQALTHSPLLFHGKAPSSQCKDTRAEHSPGDVPSAELTHGRS*