Part of scaffold_1175 (Scaffold)

For more information consult the page for scaffold_1175 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLIN1 ENSTTRG00000015526 (Bottlenosed dolphin)

Gene Details

perilipin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014707, Bottlenosed dolphin)

Protein Percentage 79.69%
cDNA percentage 81.11%
Ka/Ks Ratio 0.36637 (Ka = 0.0283, Ks = 0.0771)

PLIN ENSBTAG00000015350 (Cow)

Gene Details

perilipin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020406, Cow)

Protein Percentage 85.66%
cDNA percentage 89.6%
Ka/Ks Ratio 0.2508 (Ka = 0.0753, Ks = 0.3001)

PLIN1  (Minke Whale)

Gene Details

perilipin 1

External Links

Gene match (Identifier: BACU016085, Minke Whale)

Protein Percentage 96.51%
cDNA percentage 97.68%
Ka/Ks Ratio 0.6517 (Ka = 0.0217, Ks = 0.0332)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1596 bp    Location:555461..547470   Strand:-
>bmy_15713
ATGGGCTCCATGGCCCTGGGACTGCCTCCCCAGGAGGTGGGAGGAGGAGGTGGGATGACCTCAATACCTGCTTTCCTTCCTCTCCAGGAGCAGGAGAACGTGCTGCAGCGGGTCCTGCAGCTGCCGGTGGTGAGCAGCACCTGTGAGTGCTTCCAGAAGACCTACACCAGCACCAAGGAAGCCCACCCCCTGGTGACCTCTGTATGCAGTGCGTACGAGAAGGGCGTGCAGAGCGCCACCAGCTTGGCAGCCTGGAGCATGGAGCCGGTGGTCCGAAGGCTGTCCACCCAGTTCATAGCTGCCAACGAGCTGGCCTGCCGAGGCCTGGACCACCTGGAGGAAAAGATCCCGGCCCTCCAGTATCCTCCTGAAAAGATCGCTTCTGAGCTGAAGGACACCATCTCTACCCGCCTTCGCAGTGCCAGGAACAGCATCAGTGTGCCCATCGCCAGCACTTCAGACAAAGTCCTAGGGGCCGCTCTGGCTGGCTGTGAGCTCGCCTGGGGGATGGTCAAAGACACTGCCGAATTTGCTGCCAACACCCGAGCTGGCCAGCTAGCCTCTGGAGGGGCCGACTTGGCCTTGGGTGGTGTTGAGAAGGTGGTAGAGTTCCTCCTCCCTCCAGCCAAGGAAGAGTCAGCCCCTGCTCCAGGACACCAGCATGCCCAGAAACCTCCCCAGGCCAAGCCGGACCTCGTGAGCAGGGTTGGGACCCTGGCCAACACTCTCTCTCAACACACCTTCCAGACCACAGCCCGGGCGCTGAAACAGGGCCAGGCCCTGGCCATGTGGATCCCAGGTGTGGCGCCCCTGAGCAGCTTGGCCCAGTGGGGCGCATCGGCGGCCATACAGGTGGTGTCCCGGCGGTCGAGCGAGGTGCGGGTGCCCTGGCTGCACAACCTCACCGCCACCCGGGAGGAGGACCACAATGACCAGATGGACACAGAGGGGGAGGAGACAGAGGTGGAGGAGGAGGAATCAGAGACGGAGGAGAACAAGCTCAGTGAGGGAGCAGCCCTGCCTGGCCCACAAGGCCTCCTGGGCGGTGTGGCGCACACCCTGCAGAAGGCCCTCCAGTGCACCATCTCGGTTGTGACGTGGGCGCCTGCGGCTGTGCTGGGCACGGCAGAGTGGTTGCTGCATCTCATGCCAGCCCGTGCTGTCTCCTCCACCAAGGGCAGGGCCATGTCCCTGTCTGATGCCCTGAAGGGCGTTACTGACAACGTCGTGGACACGGTGGTGCACTATGTGCCGCTCCCCAGGCTGTCGCTGATGGAGCCCGAGAGCGAATTCCGGGAGATCGACAACCCGCCTGCCGAGGCCGAGAGCCCGGAGGCGGAGCGCAGGGGGTCCGGGGCGCCGCCCGCCGGCTCGGAGCCCGCGTCGCGCCCCGCGCCGTCCCGCGGCAGCCTGCGCAGCGCTCGGGGCCCGGGCGCGGAGGACCGAGTGGACACGGCCGCCGCGCCGCGCACCGCCTTGCCGGCCATGCCCCGCGAGAAGCCCGCGCGCAGGGTCAGCGACAGCTTCTTCCGGCCCAGCGTCATGGAGCCCATCCTGGGCCGCACGCAGTACAGCCAGCTGCGCAAGAAGAGCTGA

Related Sequences

bmy_15713T0 Protein

Length: 532 aa      View alignments
>bmy_15713T0
MGSMALGLPPQEVGGGGGMTSIPAFLPLQEQENVLQRVLQLPVVSSTCECFQKTYTSTKEAHPLVTSVCSAYEKGVQSATSLAAWSMEPVVRRLSTQFIAANELACRGLDHLEEKIPALQYPPEKIASELKDTISTRLRSARNSISVPIASTSDKVLGAALAGCELAWGMVKDTAEFAANTRAGQLASGGADLALGGVEKVVEFLLPPAKEESAPAPGHQHAQKPPQAKPDLVSRVGTLANTLSQHTFQTTARALKQGQALAMWIPGVAPLSSLAQWGASAAIQVVSRRSSEVRVPWLHNLTATREEDHNDQMDTEGEETEVEEEESETEENKLSEGAALPGPQGLLGGVAHTLQKALQCTISVVTWAPAAVLGTAEWLLHLMPARAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFREIDNPPAEAESPEAERRGSGAPPAGSEPASRPAPSRGSLRSARGPGAEDRVDTAAAPRTALPAMPREKPARRVSDSFFRPSVMEPILGRTQYSQLRKKS*