Part of scaffold_1214 (Scaffold)

For more information consult the page for scaffold_1214 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMPDL3A ENSTTRG00000000252 (Bottlenosed dolphin)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000236, Bottlenosed dolphin)

Protein Percentage 98.01%
cDNA percentage 98.38%
Ka/Ks Ratio 0.27255 (Ka = 0.0095, Ks = 0.0349)

BT.97078 ENSBTAG00000021587 (Cow)

Gene Details

acid sphingomyelinase-like phosphodiesterase 3a precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028765, Cow)

Protein Percentage 86.44%
cDNA percentage 91.56%
Ka/Ks Ratio 0.48994 (Ka = 0.073, Ks = 0.149)

SMPDL3A  (Minke Whale)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3A

External Links

Gene match (Identifier: BACU014273, Minke Whale)

Protein Percentage 96.91%
cDNA percentage 98.18%
Ka/Ks Ratio 0.65507 (Ka = 0.0165, Ks = 0.0252)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1458 bp    Location:283676..264606   Strand:-
>bmy_15728
ATGGCGCTGCTGGGCGCGCTCGTCTGCTGCCTGCTGGCTGCCTGGCACTGCCGCCCCGGCCTCGGACTGCCTCTGGCTCCCGCTGGCGGCCCGAGTCCCAGTCCGGCGGTGGGACAGTTTTGGCATGTGACTGACTTACACTTAGACCCTACTTACCACATCACAGATGACCACACAAAAGTGTGCGCTTCCTCGAAAGGTGCAAATGCCTCCAATCCTGGCCCTTTTGGAGATGTTCTATGTGATTCTCCTTATCACCTCATTTTGTCAGCATTTGATTTTATTAAAAATTCAGGACAGGAAGCATCTTTTATGATATGGACAGGGGATAGCCCACCTCATGTTCCAGTGCGTGAACTCTCAACAGACACGGTCATAAATGTGATTGCTAATATGACAACCACAGTCCAGAGTCTCTTTCCAAATCTCCAGGTTTTCCCTGCACTGGGTAATCATGACTATTGGCCACAGATGCCTAACATAGTAGTAACTGCTCAAGTGATATTTAAATTAATCCATCCATATATCTTTAGAGTTTCAATGGTGGATTATATTGTTTGTGGCCAGGATCAACTGCCTATATTCACCAGCAAGGTGTACAATGCAGTAGCAAGCCTCTGGAAGCCATGGCTGGATGAAGAAGCTATTAGTACTCTAAGGAAAGGTGGCTTTTATTCACAGAAAGTTTCAACTAATCTGAACCTTAGGATCATCAGTCTCAACACAAACTTATACTATGGCCCAAATATCGTGACCCTAAATAAGACTGACCCAGCAAATCAGTTTGAATGGCTAGAAAATACACTGAACATCTCTCAGCAAAATAAGGAGAAGGTGTACATCATAGCTCATGTTCCAGTGGGGTACCTGCCTTATTCAAGGAGCATCACGGCAATGAGAGAATACTATAATGAGAAATTGATAGATATTTTTAGAAAATACAGTAACGTCATTGCAGGACAATTTTATGGACACACTCACAGAGATAGTATTATGGTTCTTTCAGATAAAAACGGAAATCCGATAAATTCTTTGTTTGTGGCTCCTGCTGTTACTCCAGTGAAGAGTGTTTTAGAAAAACAGACCAACAATCCTGGTGTCAGACTATTTCAGTATGATCCTCGTGATTATAAATTACTGGATGTGCTGCAGTATTACTTGAACCTGACAGATGCTAATCTAAAGGGAAAATCTAATTGGAAGCTGGAGTATAACCTGACCCAGGCCTATGACATTGAAGATTTGCAGCCAAAAAGTTTGTATGAATTAGCTAAACAATTTGCAATCTTAGATAGTAAACAGTTTATAAAATACTACAATTACTTCTTTGTGAGTTATGACAGTAGGGTAATTTGTGATGGGAAATGTAAGGCCTTTCAGATTTGTGCAATTATGAATCTTGATGTTATTTCTTATACAGATTGCCTCAAACAATATTATATAAAGCACAATCCGTAG

Related Sequences

bmy_15728T0 Protein

Length: 486 aa      View alignments
>bmy_15728T0
MALLGALVCCLLAAWHCRPGLGLPLAPAGGPSPSPAVGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYHLILSAFDFIKNSGQEASFMIWTGDSPPHVPVRELSTDTVINVIANMTTTVQSLFPNLQVFPALGNHDYWPQMPNIVVTAQVIFKLIHPYIFRVSMVDYIVCGQDQLPIFTSKVYNAVASLWKPWLDEEAISTLRKGGFYSQKVSTNLNLRIISLNTNLYYGPNIVTLNKTDPANQFEWLENTLNISQQNKEKVYIIAHVPVGYLPYSRSITAMREYYNEKLIDIFRKYSNVIAGQFYGHTHRDSIMVLSDKNGNPINSLFVAPAVTPVKSVLEKQTNNPGVRLFQYDPRDYKLLDVLQYYLNLTDANLKGKSNWKLEYNLTQAYDIEDLQPKSLYELAKQFAILDSKQFIKYYNYFFVSYDSRVICDGKCKAFQICAIMNLDVISYTDCLKQYYIKHNP*