Part of scaffold_1214 (Scaffold)

For more information consult the page for scaffold_1214 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSF2 ENSTTRG00000000247 (Bottlenosed dolphin)

Gene Details

heat shock transcription factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000231, Bottlenosed dolphin)

Protein Percentage 89.01%
cDNA percentage 90.55%
Ka/Ks Ratio 0.60093 (Ka = 0.0468, Ks = 0.0779)

HSF2 ENSBTAG00000012946 (Cow)

Gene Details

heat shock factor protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037874, Cow)

Protein Percentage 95.38%
cDNA percentage 94.51%
Ka/Ks Ratio 0.15607 (Ka = 0.0267, Ks = 0.1708)

HSF2  (Minke Whale)

Gene Details

heat shock transcription factor 2

External Links

Gene match (Identifier: BACU014268, Minke Whale)

Protein Percentage 93.41%
cDNA percentage 94.65%
Ka/Ks Ratio 0.51267 (Ka = 0.0461, Ks = 0.09)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1368 bp    Location:579869..543331   Strand:-
>bmy_15732
ATGAAGCAGAGTTCGAACGTGCCGGCTTTCCTCAGCAAGCTGTGGACGCTTGTGGAGGAAACCCACACGAACGAGTTCATCACCTGGAGTCAGGTTTCATCTGCAAAACCAGAAGAAAATAAAATTCGTCAGGAAGATTTAACAAAAATTATAAGTAGTGCTCAGAAGGTTCAAATAAAACAAGAAACTATTGAGTCCAGGCTTTCTGAATTAAAAAGTGAGAATGAGTCCCTTTGGAAGGAGGTGTCAGAATTACGAGCAAAACATGCACAACAGCAACAAGTTATTCGAAAGATTGTCCAGTTTATTGTTACATTGGTTCAGAATAACCAACTTGTGAGTTTAAAACGTAAAAGACCGCTACTTCTAAACACTAATGGAGCTCAAAAGAAGAATTTGTTTCAGCACATAGTAAAAGAACCAGCTGATAATCACCATCATAAAGTGCCACACAGTAGGACTGAAGGTTTAAAGCCAAGGGAGCGGATTTCAGACGATATCATTATTTATGACGTTACTGATGATAATGCAGATGAAGAAAATATCCCAGTTATTCCAGAAACTAATGAGGATGTTATATCTGATCCCTCCAACTGTAGCCAGTACCCTGATATTGTCATTGTTGAAGATGACAATGAAGATGAATATGCACCTGTCATTCAGAGTGGAGATCAGAGTGAACCAGCCRGAGAATCCCTAAGTTCAGGCAGTGATGGCACCAGCCCTCTCATGTCTAGTGCCGTCCAGCTAAATGGCTCATCTAGTCTGACCACAGAAGATCCTGTGACCATGATGGATTCCATTTTAAATGATAACATCAATCTTTTGGGAAAGGTTGAGCTGTTGGATTATCTTGACAGTATTGATTGCAGTTTAGAGGACTTCCAAGCCATGCTGTCAGGAAGACAGTTTAGCATAGACCCAGATCTCCTGGTCGATCTTTTCACTAGTTCTGTGCAGATGAATCCCACAGATTACATCAATAATACAAAATCCGAGAATAAAGGATTAGAAACCAAGAGCAATGTAGTTCAGCCAGTTTCAGAAGAGGGAAGAAAATCTAAACCCAAAACAGATAAGCAGCTTATACAGTACACTGCCTTTCCACTTCTTGCATTCCTCGATGGGAACCCTGCTTCTACTGTTGAACAGGGGAGTACAGCATCATCAGAAGTTATGTCCTCTGTAGATAAACCCATAGAAGTTGATGAGCTTCTGGACAGCAGYTTGGACCCAGAACCAACCCAAAGTAAGCTTGTTCGCCTGGAGCCATTGACTGAAGCTGAAGCTAGTGAAGCCACACTGTTTTATTTATGTGAACTTGCTCCTGCACCTCTGGATAGTGATATGCCACTTTTAGATAGCTAA

Related Sequences

bmy_15732T0 Protein

Length: 456 aa      View alignments
>bmy_15732T0
MKQSSNVPAFLSKLWTLVEETHTNEFITWSQVSSAKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPADNHHHKVPHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQSGDQSEPAXESLSSGSDGTSPLMSSAVQLNGSSSLTTEDPVTMMDSILNDNINLLGKVELLDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQMNPTDYINNTKSENKGLETKSNVVQPVSEEGRKSKPKTDKQLIQYTAFPLLAFLDGNPASTVEQGSTASSEVMSSVDKPIEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS*