Sequence detailsbmy_15756 (Coding sequence)

Part of scaffold_1199 (SequenceType object (1))

For more information consult the page for scaffold_1199 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZEB1ENSTTRG00000011798 (Bottlenosed dolphin)

Gene Details

zinc finger E-box binding homeobox 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011188, Bottlenosed dolphin)

Protein Percentage 87.12%
cDNA percentage 86.89%
Ka/Ks Ratio 0.19875 (Ka = 0.0213, Ks = 0.1074)

ZEB1ENSBTAG00000020053 (Cow)

Gene Details

zinc finger E-box-binding homeobox 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000038655, Cow)

Protein Percentage 87.31%
cDNA percentage 87.24%
Ka/Ks Ratio 0.19273 (Ka = 0.0466, Ks = 0.242)

Additional orthologs identified in other species via the OPTIC pipeline.

ZEB1 (Human)   Zeb1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2622 bp    Location:289500..284930   Strand:-
Raw sequence 
>bmy_15756
ATGAATGTAATTTTTTGTTGTTGTTTAGGAGAGAAGCCATATGAATGCCCAAACTGCAAGAAACGTTTTTCCCATTCCGGTTCCTATAGCTCACACATAAGCAGTAAGAAATGTATCAGCCTGATGCCTGTGAACGGGCGACCACGAACAGGGCTCAAGACCTCGCAGTGTCCCTCACCATCTCTCTCGGCATCACCAGGCAGTCCCACGCGACCACAGATACGGCAGAAGATAGAGAATAAGCCCTTCCAAGAACAACTTTCCGTAAACCAAATCAAAACTGAGCCTGTGGATTATGAGTTCAAGCCCATAGTGGTTGCTTCAGGAATCAACTGTTCAACCCCTTTACAGAATGGGGTTTTCAGTGGTGGTGGCCCCTTACAGGCAACCAGTGCTCCTCAGGGTGTGGTGCAAGCCGTTGTTCTGCCAACGGTGGGTTTGGTGTCSCCCATCAGTATCAATTTAAGTGATATTCAGAATGTACTTAAAGTGGCAGTAGATGGTAATGTAATCAGGCAAGTTTTGGAGAATAATCAAGCCAATCTTGCATCCAAAGAACAAGAAACAATCAACGCTTCATCCATCCAGCAAGGTGGCCATTCTGTTATTTCAGCCATCAGTCTTCCTCTGGTTGATCAAGATGGAACAACCAAAATCATCATTAACTACAGTCTTGAACAACCTAGCCAACTTCAAGTTGTTCCTCAGAACTTAAAAAAAGAAAATCCAGTCCCCACCAACAGTTGCAAAAGTGAAAAGTTACCAGAAGATCTTACTGTTAAATCTGAGAAGGACAAAAGCTTTGAAGGAGGGGGGAATGACAGCACTTGCCTCCTGTGTGACGACTGTCCAGGGGACATCAGCGCACTTCCGGAGCTAAAGCACTATGACCTGAAGCAGCCCGCCCAGCCCCATCTGCCCCCCACACCAGAAGCTGCCAAGCCCGAGGCCTCTGCCCCCTCGGGGTCCGGAGATGGCAGTCTGTCTCCCAGTCAGCCACCTTTAAAGAACCTCCTGTCTCTTCTGAAAGCATATTATGCCTTGAATGCACAGCCAAGTGCAGAAGAGCTCTCAAAAATTGCTGACTCAGTGAACCTACCGCCGGATGTAGTGAAAAAGTGGTTTGAAAAGATGCAGACGGGGCAGACTTCAGTGCAGTCTTCTGAAGCATCTCCTCCCGAGCCAGGCAAAGCCAACACCCCTGCAAAGAACGATGATCAGCCTCAACCTACAAACGCAGATGACTCCCAGGACGGCACAAGGAATCTCCAGAGCCCTCTGAAGATAACTAGCTCCCCCGTCTTACCAGTGGGCTCGGCCGTCAATGGTTCCAGAAGCAGCGCTTCATCCCCATCCCCCCTCAACCTCTCCTCCTCCGGAAACCCACAGGGTTACTCGTACCCGGCAGAAGGGGCACAGGAAGAGCCACAAGTCGAACCTCTTGATCTTTCACTACCAAAGCAACAGGGAGAGTTATTGGAAAGGTCAACTATCACTAGTGTTTACCAGAACAGTGTTTATTCTGTCCAGGAAGAACCCTTGAACTTGTCTTGTGCAAAAAAGGAGCCACAAAAGGACAGTTGTGTCACAGACTCAGAACCAGTTGTAAATGTAATCCCACCAAGTGCCAACCCCATAAATATTGCTATACCTACAGTCACTGCCCAGTTACCCACGATTGTGGCCATCACTGACCAGAACAGCGTTCCGTGCTTGCGAGCGCTGGCGGCCAACAAGCAGACCATCCTGATCCCCCAGGTCGCGTAYACGTACTCGACTGCGGTCAGCCCCGCGGTCCAGGAAGCATCCCTGAAGGTGACCCAGCCCAACGGAAATCAGGATGAAAGGCAAGACACTAGCTCAGAAGGAGTATCAAATGTAGAAGATCAGAATGACTCTGATTCCACGCCACCCAAAAAGAAAATGCGAAAGACAGAAAATGGAATGTATGCTTGTGATTTGTGTGATAAGATATTCCAGAAGAGTAGCTCGTTGTTGAGACATAAATATGAACACACAGGTAAAAGACCTCACGAGTGCGGCATTTGCAAAAAGGCATTTAAACACAAGCATCACCTGATCGAGCACACGCGCTTGCATTCCGGGGAGAAGCCCTACCAGTGCGACAAGTGCGGGAAGCGCTTCTCCCACTCGGGCTCCTATTCCCAGCACATGAACCACCGCTACTCCTACTGCAAGAGGGAGGCCGAGGGGCCGGAGCCGGGGGCCTCGGGCCCGGGGGGCCCGCCCGCGCACCACGCGGGGGCCCGCGCCTCCCCCTCGCAGGGCGACTCGGACGAGAGGGAGAGCTCCACACGGGAGGAGGACGAGGACAGTGACAAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGACGGAGGAGCTGCAGGCGGAAAAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTGAAGGTGCGAGGGAGGGCGCGGGAGCTGGAAGCCCAGCCCGCAGCTTAGAACACAAAGTCGGCCAGGGCGGTGAGCAGGTGTCTGAAGAGAAAACAAACGAAGCCTGA

Related Sequences

bmy_15756T0 SequenceType object (3)

Length: 874 aa      View alignments
>bmy_15756T0
MNVIFCCCLGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRTGLKTSQCPSPSLSASPGSPTRPQIRQKIENKPFQEQLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGPLQATSAPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQANLASKEQETINASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKENPVPTNSCKSEKLPEDLTVKSEKDKSFEGGGNDSTCLLCDDCPGDISALPELKHYDLKQPAQPHLPPTPEAAKPEASAPSGSGDGSLSPSQPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLPPDVVKKWFEKMQTGQTSVQSSEASPPEPGKANTPAKNDDQPQPTNADDSQDGTRNLQSPLKITSSPVLPVGSAVNGSRSSASSPSPLNLSSSGNPQGYSYPAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAITDQNSVPCLRALAANKQTILIPQVAYTYSTAVSPAVQEASLKVTQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHTRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEGPEPGASGPGGPPAHHAGARASPSQGDSDERESSTREEDEDSDKEEEEEEEERETEELQAEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGAREGAGAGSPARSLEHKVGQGGEQVSEEKTNEA*