Part of scaffold_1208 (Scaffold)

For more information consult the page for scaffold_1208 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MRPL54 ENSTTRG00000004410 (Bottlenosed dolphin)

Gene Details

mitochondrial ribosomal protein L54

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004152, Bottlenosed dolphin)

Protein Percentage 60.0%
cDNA percentage 69.38%
Ka/Ks Ratio 0.68971 (Ka = 0.3802, Ks = 0.5513)

BT.30696 ENSBTAG00000008396 (Cow)

Gene Details

39S ribosomal protein L54, mitochondrial precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011049, Cow)

Protein Percentage 54.07%
cDNA percentage 64.2%
Ka/Ks Ratio 0.45075 (Ka = 0.4304, Ks = 0.9548)

MRPL54  (Minke Whale)

Gene Details

mitochondrial ribosomal protein L54

External Links

Gene match (Identifier: BACU018894, Minke Whale)

Protein Percentage 61.65%
cDNA percentage 70.18%
Ka/Ks Ratio 0.70061 (Ka = 0.3689, Ks = 0.5265)

Genome Location

Sequence Coding sequence

Length: 489 bp    Location:189496..191394   Strand:+
>bmy_15767
ATGGCGGTCAGGCGCCTCTTCAGTGCTACGTGGAGCTCGGCCGGCTGGCGGGTTCGGGAGTTCCCGAACCCCGCCGCTTCTGTAAGACTCCATGTACGAGATTATGCCAAGAGACCGGTCATTAAGGGGGGCAAAGGCGCTGTGGTCGGTGAGGCCCTGAAGGACCCAGAGGTGTGTACAGACCCCGTCCGGCTCACCACGCACGCCATGGGTGCTGTTCCAGATGAACGTGGGCCCCCCCAAGAATCTGGAGGAGCTGGACCCCGAGACCCGGGAGTACTGGCGGCTGCTGCGGAAACACAACATCTGGCGCCACAACCGGCTGAGCAAGAACCAGAAATTCTAGCGGGGGAAGGACCAGAGCACCCTGACCCTCCAGTGACCTGGAGGAGATGCGACTTCTCCGAGAACAGAGGAGACTACCCCCCTCACTGGGGTTACTGGGTGGCCCCTGCATTGAGGCTGAATCAGGGCCCTGGGGGCCAATAA

Related Sequences

bmy_15767T0 Protein

Length: 163 aa      View alignments
>bmy_15767T0
MAVRRLFSATWSSAGWRVREFPNPAASVRLHVRDYAKRPVIKGGKGAVVGEALKDPEVCTDPVRLTTHAMGAVPDERGPPQESGGAGPRDPGVLAAAAETQHLAPQPAEQEPEILAGEGPEHPDPPVTWRRCDFSENRGDYPPHWGYWVAPALRLNQGPGGQ*